| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1461 |
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| Symbol | |
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| ID | 5322319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1543281 |
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| End bp | 1544303 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640790409 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001327141 |
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| Protein GI | 150396674 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0296008 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGATT ATCATCGTAA CCTGAACAGC ATTCAGTTCG CGTGGATTGG CGCAGGATCG
ACCTCAATCT TCTCAAGGTG CTGGCAGTTA TGTTGGAAGA ACGTAGCGTC GCTCGCTGCC
GAACGCCTCT TTGTTTCTCC TTCTGCCGTC AGTCACGCGC TCGCAAGGCT GAGAACGATG
TTTTCGGATC CCCTGTTCGT CAGAACGGGA AGCGGGATGC TGCCAACCGC ACGTGCACAA
AGCCTGGAGC GCTCGCTGTC GCTTCTGAAA GCGCTGCTGG CCGCCGAGCT GGAAACAGAT
CGAGTGAGTG CGACAGAGGT GCCATTCGAA CCCGGCGAAT CGGTGCGCGA CGTTCGAATC
GTCTCCCCAG GGGCCCTGGA GCTCTCGCTC CTGCCGACGT TGGCGACGAT GTTGCGAGCG
CGGGCGCCGC AGTGGTCGCT CACGATCGAA CCGTTCGAGC GGCGCAGCTA CGAGACCGAT
CTCGCCACAG GCCGGGTCGA CTTCGTCCTT TCGGTCGGAG GCACAACACC CATCGGACAA
CTCGTCGATG CTGACGTCCT ATGGGAGGAT GAATTCGTTG TCCTGGCCGG TCCGCGCTCG
GTGCTTCATG AAGGTTTCGA TCGGATTTCG ACCGAGCTCT ACCTGGCGCA GCAACACATC
TATCCGCTTC CCTGGCCGAC TTCACAGAAC TACCTTGATG TAGAGCTCGC TCGAGCCGGC
AGACACCGCA AGATTGCCTT CTCCGTGCCG AGTTATGCCG CCCTGGGTTA CGTACTCGAT
ACCACGGACC TCATAGCTTC GATGCCGGAC CGGTCGGCAC GAGCCCTGAT GTGCTGCCAT
CCCGATTTGA GGCTCATTCA CCTTGACCCT CCCCGAAAGT CACAGCTTTC CTTGCTTTGG
GGTATATCTG CCTTGCGAGA GCCGGCGATT TCGTGGGTCC GAACCATAAT TCGAAACGCC
GCAGCCGCAT ATGACGGCGC CGACGGAGGA ACCATCCGGA GCATCAACAG CGATCAAGTC
TAG
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| Protein sequence | MIDYHRNLNS IQFAWIGAGS TSIFSRCWQL CWKNVASLAA ERLFVSPSAV SHALARLRTM
FSDPLFVRTG SGMLPTARAQ SLERSLSLLK ALLAAELETD RVSATEVPFE PGESVRDVRI
VSPGALELSL LPTLATMLRA RAPQWSLTIE PFERRSYETD LATGRVDFVL SVGGTTPIGQ
LVDADVLWED EFVVLAGPRS VLHEGFDRIS TELYLAQQHI YPLPWPTSQN YLDVELARAG
RHRKIAFSVP SYAALGYVLD TTDLIASMPD RSARALMCCH PDLRLIHLDP PRKSQLSLLW
GISALREPAI SWVRTIIRNA AAAYDGADGG TIRSINSDQV
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