Gene Smed_1430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1430 
Symbol 
ID5322282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1511807 
End bp1512208 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content65% 
IMG OID640790373 
Producthypothetical protein 
Protein accessionYP_001327111 
Protein GI150396644 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.731285 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000462383 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGAAGC TAGTATATAT TACCGCGACC GCAGCGCTGC TTGCCAGTGG TGCGGCCGCA 
CAGCAGTCCG ACGGCACAAA CGCAGCGACC GGCATGGTGG GCGGCGCCGC AACCGGGGCC
ATTCTCGGGG GCCCGGTCGG AGCTGGAGTA GGCGCGGTGG TCGGCGCCAC CCTTGGCGGC
GCGCTGACCC CTCCGCCTGC CGAGGTGGTC ACCTATGTAC AGCAGCAACC GGCACCCCCA
TCAGTGGTCG TTCAGCAACC TGTCGCAGTC GGCAAACCCA TTCCTGAAAC GGTCGTGCTG
ACGCCGGTTC CGGAGAACCC GACCTACGCA TACGCAGTGG TCAATGAACG CCGCGTCATC
GTGGAGCCGA AATCGCGTAC GGTCGTCCAG GTTGTCAACT GA
 
Protein sequence
MKKLVYITAT AALLASGAAA QQSDGTNAAT GMVGGAATGA ILGGPVGAGV GAVVGATLGG 
ALTPPPAEVV TYVQQQPAPP SVVVQQPVAV GKPIPETVVL TPVPENPTYA YAVVNERRVI
VEPKSRTVVQ VVN