Gene Smed_1403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1403 
Symbol 
ID5322254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1481925 
End bp1482422 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content62% 
IMG OID640790345 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001327084 
Protein GI150396617 
COG category[R] General function prediction only 
COG ID[COG3153] Predicted acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.348184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATTC GTCCGGACAC CGAAGGCGAC GACGAGGCGA TCCGGCAGAT TACCGAGGCG 
GCTTTCGCCG GTCAGCCCTA TAGCAGCCAG ACGGAGGCTC GGATCATCGA TCGGTTGCGC
TCCGAGGACG CGCTGACTCT GTCCCTCGTC GCCGAGGAAG AGGGCGAGAT AATCGGCCAC
ATCGCTTTCT CGCCGGTGAC GATCGCCCCC TTTGCGGTCG GCTGGTATGG GCTTGGTCCG
GTAGCGGTGC GGCCGGACCG GCAAGGACAC GGCACAGGCA GTGCACTTGT GCGCCGCGGG
CTCGATATGC TTCGCAAGGC GGGAGCCTCA GGCTGCGTGC TTGCGGGGGA TCCGGCTTTC
TATGGGAGAT TCGGGTTCCG AAATGAACCT GCGCTGGTGT ATGAGGGTTG TGCGCCGCAA
TATTTCATGG CTCTACCCTT GTCGGGAGCA TTGGTTTCCG GCACCGTCAC ATATCATCCC
GCCTTTGGAG CGGAATGA
 
Protein sequence
MIIRPDTEGD DEAIRQITEA AFAGQPYSSQ TEARIIDRLR SEDALTLSLV AEEEGEIIGH 
IAFSPVTIAP FAVGWYGLGP VAVRPDRQGH GTGSALVRRG LDMLRKAGAS GCVLAGDPAF
YGRFGFRNEP ALVYEGCAPQ YFMALPLSGA LVSGTVTYHP AFGAE