| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1390 |
|---|
| Symbol | |
|---|
| ID | 5322241 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 1465780 |
|---|
| End bp | 1466109 |
|---|
| Gene Length | 330 bp |
|---|
| Protein Length | 109 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640790332 |
|---|
| Product | hemimethylated DNA binding protein |
|---|
| Protein accession | YP_001327071 |
|---|
| Protein GI | 150396604 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3785] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02097] hemimethylated DNA binding domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.340572 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.9346 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAA GAAACGCCAA ATTTGAGATC GGACAGGTGG TTCGCCATCG GATGTTCCCG
TTCCGCGGCG TCATCTTCGA CGTCGACCCG GAATATGCGA ACACCGATGA ATGGTGGAAT
GCGATTCCGC AGGAGATCAG GCCCGAAAAG GACCAGCCCT TCTATCATCT GTTCGCAGAA
AACGAAGAAA GCGAGTACGT CGCCTATGTA TCGGAACAGA ATCTCGTTTC CGACGAGAGC
GACAGGCCGG TCCGCCACCC CCAGGTAGAC GCCCTGTTCG AACGGGCCGA TGCCGGGCAC
TATAAGCCCA AGGCGGTCTA TCAGCATTAG
|
|---|
| Protein sequence | MKQRNAKFEI GQVVRHRMFP FRGVIFDVDP EYANTDEWWN AIPQEIRPEK DQPFYHLFAE
NEESEYVAYV SEQNLVSDES DRPVRHPQVD ALFERADAGH YKPKAVYQH
|
|---|
| |