Gene Smed_1363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1363 
Symbol 
ID5322214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1444310 
End bp1445350 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content61% 
IMG OID640790306 
Productcysteine synthase A 
Protein accessionYP_001327046 
Protein GI150396579 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0031] Cysteine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGTTC TTCCGTCCGT GCTCGAAGCA ATCGGCAATA CGCCGCTGAT CCGGCTCAAG 
GCCGTGTCCG AAGCGACCGG CTGCAACATC CTCGGCAAAG CGGAGTTTCT CAACCCTGGG
CAGTCGGTAA AGGATAGGGC GGCGCTCTGG ATCATCCGCC AGGCTGAAAA GGCCGGCCAA
TTGCGACCGG GCGGTGTGAT CGTCGAAGGC ACCGCGGGCA ATACCGGCAT TGGCCTTGCC
GTTGTCGCCA GCGCGCTCGG ATACCGCACC GTCATCGTTA TCCCCGAGAC ACAGAGCCAG
GAGAAGAAGG ACGCACTGCG CCTGCTTGGC GCCGAGCTGG TCGAAGTTCC GGCGGTACCG
TACAGGAATC CGAATAATTA CGTGAAGATC TCCGGCCGTC TGGCCGCCCG ACTTGCCGAA
ACCGAGCCGA ATGGCGCGAT CTGGGCAAAC CAGTTCGACA ATGTCGCCAA TCGGCAGGCC
CATATCGACA CGACCGCGCC CGAGATATGG CGCGACACCG ATGGAAAGGT CGACGGGTTC
ATTTGCGCCG TCGGCTCCGG CGGCACTCTT GCCGGTGTGG CGGAAGGCTT GCGCGCCCGC
AAGGCGGGGA TCAAGATCGG CATCGCCGAT CCGGAAGGCG CGGCACTCTA CAATTTCTAT
GCCCATGGCG AGCTCAAGTC GAGTGGAAGC TCGATCACCG AAGGAATCGG TCAGGGGCGA
ATCACCGCCA ATCTCGAAGG TTTCACGCCG GACTTCGCCT ACCAGATTCC AGACGCCGAG
GCGGTTCCCT ACGTCTTCGA GCTCATTGAA AAAGAAGGCA TCTGCATCGG CGGATCGACC
GGCATCAACG TCGCCGGAGC CGTGCGGCTT GCTCGTGAGC TCGGTCCGGG ACACACGATC
GTGACGATCC TCTGTGACTA TGGTAACCGC TATCAGTCGA AGCTCTTCAA TCCGGACTTC
CTGGCCTCCA AGGGTCTGCC TGTCCCGGCC TGGCTGAAGA CGGCTTCGAA CATTGCAGTG
CCATACGAAC CCGCTGGATA G
 
Protein sequence
MPVLPSVLEA IGNTPLIRLK AVSEATGCNI LGKAEFLNPG QSVKDRAALW IIRQAEKAGQ 
LRPGGVIVEG TAGNTGIGLA VVASALGYRT VIVIPETQSQ EKKDALRLLG AELVEVPAVP
YRNPNNYVKI SGRLAARLAE TEPNGAIWAN QFDNVANRQA HIDTTAPEIW RDTDGKVDGF
ICAVGSGGTL AGVAEGLRAR KAGIKIGIAD PEGAALYNFY AHGELKSSGS SITEGIGQGR
ITANLEGFTP DFAYQIPDAE AVPYVFELIE KEGICIGGST GINVAGAVRL ARELGPGHTI
VTILCDYGNR YQSKLFNPDF LASKGLPVPA WLKTASNIAV PYEPAG