Gene Smed_1246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1246 
Symbol 
ID5322093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1336608 
End bp1336898 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content60% 
IMG OID640790187 
Productregulatory protein ArsR 
Protein accessionYP_001326931 
Protein GI150396464 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.675599 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.257925 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGAG ATGAAATTCT AAAAGCGCTG GCGCATCCGA CGCGCGTGGA GATTCTAACC 
TGGCTGAAGG AGCCGCAGGC TCATTTCTCG GGCCAGGAGC ATCCGTTCGA CATGGGCGTG
TGTGCCGGGC AGTTCGAGAG GTGCGGCCTC TCGCAGTCTA CGGTCTCGTC GCACCTGGCT
GTGCTGCAGC GCGCTGGTCT GGTGTCGAGC CGCCGCGTCG GCCAGTGGGT CTTCTACAAG
CGCAATGAGG AGACGATCGC CGAATTTCTA AAGACGATCG GCAATCTCTG A
 
Protein sequence
MDRDEILKAL AHPTRVEILT WLKEPQAHFS GQEHPFDMGV CAGQFERCGL SQSTVSSHLA 
VLQRAGLVSS RRVGQWVFYK RNEETIAEFL KTIGNL