| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1243 |
|---|
| Symbol | |
|---|
| ID | 5322090 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 1334015 |
|---|
| End bp | 1334524 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640790184 |
|---|
| Product | GCN5-related N-acetyltransferase |
|---|
| Protein accession | YP_001326928 |
|---|
| Protein GI | 150396461 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1247] Sortase and related acyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.722913 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.335188 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCA GGGACGCCAT TGAGACCGAC CTCCCGGCAA TTTGCGCCAT CTACAATGAT
GCCGTGGCGA ATACGACGGC GATCTGGAAC GAGACCCTTG TCGATGTCGC CAATCGAGCC
ACATGGCTTG ACGCGCGCAA CTCTGCCGGA TTGCCCGTGC TTGTCGCGCT GTCCGGCACG
GGCGAAGTTG TCGGCTATGC CTCTTTCGGC GAGTGGCGTG CCTTTGATGG CTACCGGCAC
ACCGTGGAGC ACTCGGTCTA CGTCCGGTTG GACCAGCGCG GGGGCGGCAT AGGCCGGGCG
CTGATGCTTG AACTCATCGG CCGGGCCGAA GGGCTTGGCA AACACGTAAT GATCGCGGGG
ATAGAATCGG GAAACCTGCC GTCGATCCGC CTCCATGAGC AATTGGGCTT TCGGCAGACC
GGGCATATGA AGGAGGTGGG CACGAAGTTC GGCCGCTGGC TCGACCTTAC CTTCATGCAG
CTGATCCTGA GCAGCGGCTC ACCTGATTGA
|
|---|
| Protein sequence | MKIRDAIETD LPAICAIYND AVANTTAIWN ETLVDVANRA TWLDARNSAG LPVLVALSGT
GEVVGYASFG EWRAFDGYRH TVEHSVYVRL DQRGGGIGRA LMLELIGRAE GLGKHVMIAG
IESGNLPSIR LHEQLGFRQT GHMKEVGTKF GRWLDLTFMQ LILSSGSPD
|
|---|
| |