Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1236 |
Symbol | |
ID | 5322083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1322921 |
End bp | 1323433 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640790177 |
Product | single-stranded DNA-binding protein |
Protein accession | YP_001326921 |
Protein GI | 150396454 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0629] Single-stranded DNA-binding protein |
TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.213972 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.132188 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGGTA GCGTCAACAA GGTGATCTTG ATCGGAAATG TCGGGGCCGA CCCGGAAATC CGGCGCACGC AGGATGGCCG GCCGATTGCC AATCTCAGAA TTGCCACCTC CGAAAGCTGG CGCGACCGTA ACTCCGGCGA GCGCCGGGAG AAGACGGAAT GGCATACTGT CGTCGTCTTC AACGAGGGTC TTTGCAAAGT CATCGAGCAA TATGTGAAAA AGGGCGCCAA ACTCTATATC GAAGGCCAGT TGCAGACCCG CAAATGGCAG GACCAGAACG GCAATGACCG CTATTCGACC GAGATCGTCC TGCAGGGCTT CAATTCGACG CTGACGATGC TAGACGGCCG CGGCGAGGGC GGCGGTGCGA GCCGCGGCGG CAGCGATCTC GGAGGCGGCG GATACGAGGA ATACGATCAG TCGCGGGGGC AATCGTCAGG CGCCCGGTCG GGCGGCCAGT CGAACCAGGG CGGCAACTTC TCGCGCGATC TCGACGACGA CATTCCGTTC TGA
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Protein sequence | MAGSVNKVIL IGNVGADPEI RRTQDGRPIA NLRIATSESW RDRNSGERRE KTEWHTVVVF NEGLCKVIEQ YVKKGAKLYI EGQLQTRKWQ DQNGNDRYST EIVLQGFNST LTMLDGRGEG GGASRGGSDL GGGGYEEYDQ SRGQSSGARS GGQSNQGGNF SRDLDDDIPF
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