Gene Smed_1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1236 
Symbol 
ID5322083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1322921 
End bp1323433 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content61% 
IMG OID640790177 
Productsingle-stranded DNA-binding protein 
Protein accessionYP_001326921 
Protein GI150396454 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.213972 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.132188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGTA GCGTCAACAA GGTGATCTTG ATCGGAAATG TCGGGGCCGA CCCGGAAATC 
CGGCGCACGC AGGATGGCCG GCCGATTGCC AATCTCAGAA TTGCCACCTC CGAAAGCTGG
CGCGACCGTA ACTCCGGCGA GCGCCGGGAG AAGACGGAAT GGCATACTGT CGTCGTCTTC
AACGAGGGTC TTTGCAAAGT CATCGAGCAA TATGTGAAAA AGGGCGCCAA ACTCTATATC
GAAGGCCAGT TGCAGACCCG CAAATGGCAG GACCAGAACG GCAATGACCG CTATTCGACC
GAGATCGTCC TGCAGGGCTT CAATTCGACG CTGACGATGC TAGACGGCCG CGGCGAGGGC
GGCGGTGCGA GCCGCGGCGG CAGCGATCTC GGAGGCGGCG GATACGAGGA ATACGATCAG
TCGCGGGGGC AATCGTCAGG CGCCCGGTCG GGCGGCCAGT CGAACCAGGG CGGCAACTTC
TCGCGCGATC TCGACGACGA CATTCCGTTC TGA
 
Protein sequence
MAGSVNKVIL IGNVGADPEI RRTQDGRPIA NLRIATSESW RDRNSGERRE KTEWHTVVVF 
NEGLCKVIEQ YVKKGAKLYI EGQLQTRKWQ DQNGNDRYST EIVLQGFNST LTMLDGRGEG
GGASRGGSDL GGGGYEEYDQ SRGQSSGARS GGQSNQGGNF SRDLDDDIPF