Gene Smed_1229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1229 
Symbol 
ID5322076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1310585 
End bp1311133 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content60% 
IMG OID640790170 
Producthypothetical protein 
Protein accessionYP_001326914 
Protein GI150396447 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.11632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.418302 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCA TCATCACGAC GTGCCTTTTC AGTCAGTCAC AGAAGCCCAG AAGTGCGCCC 
AACGTTGCCG AGTTCCTTGA AGACAACGAG ATCTTTCTGA CGCCGTCGAC GCTGGTCGAC
ATCGAATTGG GGATTGCACA ATGCGCCGTC ACGGATCCCG GCCGGGCCGC GAAGCTGCGT
GAATGGCTGA AATCCGAACG GGTTAAGTAT GCCGTTGTTA CCGACCAAAG CGAGCGCTTT
CAGAAAGCCC TGGCGAAGCT GGTCGCCTGC AAGCCGATCC AGGGCCTGTG GACCTGCGAA
CCAGCAGCCA AGCAGTTCAC ATTCCGACAG ACGCTGTGGG TTGCGGCCGC AGCTCTCGCG
AACGAGCTGC CTATCGCCAC AAAATCAGTC AGGATGTACA GCGAGATCGA TCGGCACGTC
CCGCTGCCGG GAATCTACAA TCCGGTTGAC ATGGTCTGGC ACCCGCCGAG CGCTCCGCCT
CGAAACCGTA TCCGGCGGAG AAGGCGAGCG GCGGACAACG GCTTCGCCGC GCCCGCCACT
ACAGCATGA
 
Protein sequence
MKFIITTCLF SQSQKPRSAP NVAEFLEDNE IFLTPSTLVD IELGIAQCAV TDPGRAAKLR 
EWLKSERVKY AVVTDQSERF QKALAKLVAC KPIQGLWTCE PAAKQFTFRQ TLWVAAAALA
NELPIATKSV RMYSEIDRHV PLPGIYNPVD MVWHPPSAPP RNRIRRRRRA ADNGFAAPAT
TA