Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1229 |
Symbol | |
ID | 5322076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1310585 |
End bp | 1311133 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640790170 |
Product | hypothetical protein |
Protein accession | YP_001326914 |
Protein GI | 150396447 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.11632 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.418302 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATTCA TCATCACGAC GTGCCTTTTC AGTCAGTCAC AGAAGCCCAG AAGTGCGCCC AACGTTGCCG AGTTCCTTGA AGACAACGAG ATCTTTCTGA CGCCGTCGAC GCTGGTCGAC ATCGAATTGG GGATTGCACA ATGCGCCGTC ACGGATCCCG GCCGGGCCGC GAAGCTGCGT GAATGGCTGA AATCCGAACG GGTTAAGTAT GCCGTTGTTA CCGACCAAAG CGAGCGCTTT CAGAAAGCCC TGGCGAAGCT GGTCGCCTGC AAGCCGATCC AGGGCCTGTG GACCTGCGAA CCAGCAGCCA AGCAGTTCAC ATTCCGACAG ACGCTGTGGG TTGCGGCCGC AGCTCTCGCG AACGAGCTGC CTATCGCCAC AAAATCAGTC AGGATGTACA GCGAGATCGA TCGGCACGTC CCGCTGCCGG GAATCTACAA TCCGGTTGAC ATGGTCTGGC ACCCGCCGAG CGCTCCGCCT CGAAACCGTA TCCGGCGGAG AAGGCGAGCG GCGGACAACG GCTTCGCCGC GCCCGCCACT ACAGCATGA
|
Protein sequence | MKFIITTCLF SQSQKPRSAP NVAEFLEDNE IFLTPSTLVD IELGIAQCAV TDPGRAAKLR EWLKSERVKY AVVTDQSERF QKALAKLVAC KPIQGLWTCE PAAKQFTFRQ TLWVAAAALA NELPIATKSV RMYSEIDRHV PLPGIYNPVD MVWHPPSAPP RNRIRRRRRA ADNGFAAPAT TA
|
| |