| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1202 |
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| Symbol | |
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| ID | 5322049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1281895 |
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| End bp | 1283778 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640790143 |
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| Product | ATPase central domain-containing protein |
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| Protein accession | YP_001326887 |
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| Protein GI | 150396420 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0870142 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.869838 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCGG CAAAACCTGA CGAGCGGAAG ATCTCGCTCG AACTGACCAC CTATGCCAAT
TCTCTGCGCA TCGCGTTGAG GCGGTGCGGG ATTTTTCTGA AGGGCGACAA GGCTGTAGGC
TTGCTACTGC CGCCTCAAGC GGACCTCGAG ACTTACCAGC AGGCAGTCAA ATCGGTCCTG
GTTGGCGGCG GAATCCTCCA CTACGCTGTC CCACTGGTGC ACGTCAGCGC TTACAAGGGG
GAGACGGACG CGGACGACGC AGTCAAGACC GTCTCGCGGA GCAACGCAGT GATCGTCGTG
ATCGCGCACG GTGCCGATCT GCCCCCAGAA CTCTCGGTCT CACTGGATCG TCTCGAGCAG
GTGACCGCGG TCAAGCCGTA TCATCTGATC GCTGCGGCAA GGACGGTACT CGATGCGGTA
ATCACGCGGG ATCAGGCCAC TGCGCTGTTC TCGTATCCTC TGCCGTTGAT GTTCGCCGCT
CTCAGGCGGT CACGCCCAAT CGAAGTCACC CTGGAGAAGC TGGCAGCTTC GATGGATTTG
CAGGCGGTGC CGGAGGTCAA GCGCGCGGTC GCTTGGGAGC CGAGGATCGA ACAGCTTGCA
GGCTATGGGA AGGCCACGGA TTGGGCGCTG GACCTCGTCG AGGATATCAC CGCGTGGAGA
CAGGGAGGCG TCGAGTGGTG CGACGTGGAC GCGGGATTGC TGCTGAGCGG TCCGCCAGGC
TGTGGCAAGA CCCTGTTCGC GAGCGCGGTA GCCAGATCGT GTGAAGCTTC TTTCTTCGCT
GTATCGAGTG CGGTTTGGCA ATCCCACGGC CACCTCGGTG ACATGTTGCG CGCAATGCGG
AAATCATTCG AGCAAGCGAT CGCTGCCGCA CCGTCGATTT TATTGATTGA CGAATTCGAT
TCCTTTGGCT CCCGAAAGAA CCTTCGGGGA GATGGCGCAT CTTATGGTCT ACAAGTGATC
AATGCCCTTC TCGAACACCT TGATGGCGCT GTGGGGCGCG AAGGTGTCGT CGTGATCGCG
GCTACCAACA GGCCGGACGA TATCGATGAG GCGCTCCGTA GGCCGGGTCG TCTGGATCGC
CACATTGCGG TGGAGATGCC CGATCAGGAA GCACGTGAGC AGATCCTGTC GGCGCATGCT
GGCGTGGCGT TGCCGCGGGA CGAACTGAAA ACGATCGCGG TGGCGACCAG TGGCTATTCC
GGGGCAGCTT TACGGCAGCT TACCCGTGAT GCGCGCCGGA TCGCTAGAAA AGCACGGAGG
TCGGTCTGCG GTTCCGACTT CATGTCGATC GTGCCGCCCG TCGCTGTGTT AACTCATAAG
GAGCGATGGC AAGTGTGTGT TCATGAGGCT GGACACGCGA TCGTGGGGCT CGCGCTCGGT
ACCGGTGATA TCGAGGCTAT CGTCGTCGCC CGTCAGGCAG CGCACCGGGA TGATAGCGTG
GGGCACGTCG AATGGCGCCG ACCAGTTGTG CTCAATCGGA CGCTTTGGGC TTACAGGAAC
GAGATTGCGA TGCTGCTCGG TGGCAGGGCT GCCGAAAAGG AAGTCCTGGC CGAAATGTAC
GTCGGCTCGG GTGGCGTTGA GGGATCCGAT CTTAATCGGG CAGCGGACAT TGCGACAATT
CTAATTGCCG GCCACGGTGT TCAAGGGCTC GGGTATACCG ACGTCTCCCG ATCGCGAGAT
CTCGATCAGC TTCGTCGGAC TGATGTCGTC TTGCGGAGGA GGGTGGAGCG GCTGCTGGCG
GAGGAACTGG CGCGAGCGGA GGATATCGTC AGGGAGCGGC GGGGCGATGT GATGCGCGTT
GCGGAAGCGC TCTTGGAACA CGAGGTGCTA TCGGGCGAAG GTGTCGCGAA GTTAATCCTA
GGACGACGAA ATTCTCAGTT CTAG
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| Protein sequence | MKSAKPDERK ISLELTTYAN SLRIALRRCG IFLKGDKAVG LLLPPQADLE TYQQAVKSVL
VGGGILHYAV PLVHVSAYKG ETDADDAVKT VSRSNAVIVV IAHGADLPPE LSVSLDRLEQ
VTAVKPYHLI AAARTVLDAV ITRDQATALF SYPLPLMFAA LRRSRPIEVT LEKLAASMDL
QAVPEVKRAV AWEPRIEQLA GYGKATDWAL DLVEDITAWR QGGVEWCDVD AGLLLSGPPG
CGKTLFASAV ARSCEASFFA VSSAVWQSHG HLGDMLRAMR KSFEQAIAAA PSILLIDEFD
SFGSRKNLRG DGASYGLQVI NALLEHLDGA VGREGVVVIA ATNRPDDIDE ALRRPGRLDR
HIAVEMPDQE AREQILSAHA GVALPRDELK TIAVATSGYS GAALRQLTRD ARRIARKARR
SVCGSDFMSI VPPVAVLTHK ERWQVCVHEA GHAIVGLALG TGDIEAIVVA RQAAHRDDSV
GHVEWRRPVV LNRTLWAYRN EIAMLLGGRA AEKEVLAEMY VGSGGVEGSD LNRAADIATI
LIAGHGVQGL GYTDVSRSRD LDQLRRTDVV LRRRVERLLA EELARAEDIV RERRGDVMRV
AEALLEHEVL SGEGVAKLIL GRRNSQF
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