| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1197 |
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| Symbol | |
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| ID | 5322044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1278066 |
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| End bp | 1278629 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640790138 |
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| Product | PilT domain-containing protein |
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| Protein accession | YP_001326882 |
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| Protein GI | 150396415 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.814698 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.467575 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCGAAC CTGCGCTCCT GCTCGATACC GACATCGTAA GCCTGATGGG CCGAAGGCGT
TCTCCTCCCG GCCTCCGGAC ATGGCTCTTG CGGGTCGGAA TCCACCGCCT GAATATTAGC
TATCCTGTTT TAACAGAACT GATGCGCGGC GCCCACCTCA GACAGCGTGA CGACCCGGAA
AAGGCCGAGC GCATCATGGC CTGGGTGAAC GACATCCTGA GCACCGACTT TCCGATCCCG
CCGATGTCCC CTCAGGTTGC CTACATTTAT GCACAGATGA CATCGGTGCC ATGCCTTAGA
TCCCTGTGGA CGGTCCAGCG CAGCGAGAAG GCGACGCGCA TGGGGCACGA CCTCATGATC
GCGGCGGTGG CGATCACTCA TGGCCTGCCG ATTCTGACCG CAAATGTCCG TGACTACCTG
AAGATACATC AGTTCTTTCC GCTGCCAGGA GTGTACCAGC CCTTGGAATC GCGATGGCAC
GTGCCGCCCG AAACAGAAAT CTTTCTTCCA CGCCTGGACG AAATGGAGAG ATGCCGTGAC
GATGAGTTAC TACCGACGCT GTGA
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| Protein sequence | MPEPALLLDT DIVSLMGRRR SPPGLRTWLL RVGIHRLNIS YPVLTELMRG AHLRQRDDPE
KAERIMAWVN DILSTDFPIP PMSPQVAYIY AQMTSVPCLR SLWTVQRSEK ATRMGHDLMI
AAVAITHGLP ILTANVRDYL KIHQFFPLPG VYQPLESRWH VPPETEIFLP RLDEMERCRD
DELLPTL
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