Gene Smed_1180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1180 
Symbol 
ID5322026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1257614 
End bp1257814 
Gene Length201 bp 
Protein Length66 aa 
Translation table11 
GC content55% 
IMG OID640790121 
Producthypothetical protein 
Protein accessionYP_001326866 
Protein GI150396399 
COG category[S] Function unknown 
COG ID[COG5457] Uncharacterized conserved small protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.278308 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0615222 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCCA GCAAGAGAGA TAGAGCGCTG GCGAACGACC TAGAAAGGAA TAGGATCATG 
AACCTCGCAC GTTCTTTCAA CAACTGGCGC AAGTATCGTC AGACCTGCAA CGAACTCGGC
CGCATGAGCG ATCGGGAACT GACTGACCTC GGCATCGGCC GGGCAGACAT TCCCTACGTT
GCGCGTCAGG CAATCAAGTA A
 
Protein sequence
MMASKRDRAL ANDLERNRIM NLARSFNNWR KYRQTCNELG RMSDRELTDL GIGRADIPYV 
ARQAIK