| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1176 |
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| Symbol | |
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| ID | 5322022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1254252 |
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| End bp | 1255094 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640790117 |
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| Product | putative phytoene synthase protein |
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| Protein accession | YP_001326862 |
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| Protein GI | 150396395 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.691183 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0670648 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAACAGT CCGATGACCA AATTCTCGCG ACCCTGCGGG ACACCGACCG CGATCGTTAC
CTGGCCTGTC TGCTTTCTCC GGTAGAGAAG CGGCATTCGC TCGCGGCACT TTATGCCTTC
TACGCCGAGA TCGCCCGCGT CCGTGACATG GTCAAGGAGC CGCTACCCGG TGAGATCCGG
CTGCAGTGGT GGCGCGACAT TCTCGAAAAC GAAAAGTCGG ACGGCGGGGG GCATCCTTTA
GCCGAAGCGC TCCTGCGATG CGTTCGCGAG CATCAGCTGC CTGTTCGCGT TCTGCAGGAC
ATGATCGACG CACGCATTTT CGATCTTTAC GAGGATCCGA TGCAGGACAG GGCGGCGCTC
GAAGGCTATG CCGGTGAAAC CGCATCGGCG CTCATCCAGC TCTCTTCGCT GATCCTCGAC
CCGGTCAACG CGGCGGAATC CGCAGACGCG GCCGGTCATG CCGGTGTCGC TCAGACGATC
GCCGGTCTCC TGCTTCTTCT GCCTGTTCAT GTCGGGCGTG GCCAGGTCTA TTTGCCTGCT
GAGATTTTGA GCGCAACGGG GCTCGACAGG GAGGCTCTCC TTGCGGTGAA CGACGAGGGC
GCCGTCGAAA ACGCCATCCG CGCATTTTGC GGTCTCGGCC GCGATCATCT TGCCAGGGCG
CGCAAGAGTG CCAGTTCGAT TTCGGCCCGG AATTTCTCCG CCTTCATACC CGTCGCCCTG
GCCGAACCTG TGTTCGACCG TGCCGAGGCC GCCGGAGCGC GAATCCTTCG TCAGCCACTG
CAGGCACCGC AATGGCAGCG GCAATGGCGG ATGTGGCGGG CGAGCCGGCG TCGGAAATTT
TAG
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| Protein sequence | MQQSDDQILA TLRDTDRDRY LACLLSPVEK RHSLAALYAF YAEIARVRDM VKEPLPGEIR
LQWWRDILEN EKSDGGGHPL AEALLRCVRE HQLPVRVLQD MIDARIFDLY EDPMQDRAAL
EGYAGETASA LIQLSSLILD PVNAAESADA AGHAGVAQTI AGLLLLLPVH VGRGQVYLPA
EILSATGLDR EALLAVNDEG AVENAIRAFC GLGRDHLARA RKSASSISAR NFSAFIPVAL
AEPVFDRAEA AGARILRQPL QAPQWQRQWR MWRASRRRKF
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