| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1166 |
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| Symbol | |
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| ID | 5322012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1242799 |
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| End bp | 1243641 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640790107 |
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| Product | Sec-independent protein translocase, TatC subunit |
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| Protein accession | YP_001326852 |
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| Protein GI | 150396385 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.316189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.143694 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCG AGATCGAGGA CCGGCCGCAG CCGCTTTTGG AGCACCTGAT CGAGCTGCGC
ACACGTTTGA TGTGGGCGGT AGGTGCCTTC TTTGGCGCCT TCCTTGTCTG CTTCTATTTT
GCCAAGCAGC TGTTCAACCT TCTTGTTCTG CCGTTCAAAT GGGCCGTGAG CTGGGCAGGG
CTCAGCCATC GGAACGTCGA ACTTATCTAC ACCGCGCCGC AGGAGTTCTT TTTTACCCAG
ATCAAGGTCG CAATGTTTGG TGCGCTGGTG ATCGCGTTTC CCGTCATCGC CTCACAGGTC
TACAAGTTCG TCGCACCTGG TCTCTATAAG AACGAGCGCG CTGCTTTCCT TCCGTTTCTC
GTCGCTTCGC CGCTCCTGTT TCTGCTTGGC GGCGCGCTGG TCTATTTCTT CTTCACGCCC
ATGGTCATGT GGTTCTTCCT GGCGATGGAG CAGGGCGGCG GCGAGGGGGA GGTGGCGATC
CAGCTCCTGC CGAAGGTATC CGAGTATCTT AGCCTCATCA TGTCACTGGT CTTCGCCTTC
GGGCTGGTGT TCCAGCTGCC TGTGGTGACG ACACTTCTGG CACGTGTCGG CTTCGTCACG
TCCCAAGGGC TCGCCGAAAA GCGCAAATAC GCGATCGTGA TCGCCTTCGT AGTTGCGGCG
GTTCTGACGC CGCCGGATCC GGTTTCCCAG ATCGGCCTTG CGCTGCCAGC CATCCTTCTC
TACGAAATTT CAATCTATAC GGCGCGAATC GTTGAAAGGC GACGGGCTGC CGAGGCCGTC
GAGCGCGAGG CTGCCACAGA GCAGGAAAGC TCATCCGAGA CGGCCGACGC CGCCAAGAGC
TGA
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| Protein sequence | MSREIEDRPQ PLLEHLIELR TRLMWAVGAF FGAFLVCFYF AKQLFNLLVL PFKWAVSWAG
LSHRNVELIY TAPQEFFFTQ IKVAMFGALV IAFPVIASQV YKFVAPGLYK NERAAFLPFL
VASPLLFLLG GALVYFFFTP MVMWFFLAME QGGGEGEVAI QLLPKVSEYL SLIMSLVFAF
GLVFQLPVVT TLLARVGFVT SQGLAEKRKY AIVIAFVVAA VLTPPDPVSQ IGLALPAILL
YEISIYTARI VERRRAAEAV EREAATEQES SSETADAAKS
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