Gene Smed_1150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1150 
Symbol 
ID5321996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1221690 
End bp1222472 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content64% 
IMG OID640790091 
Producthypothetical protein 
Protein accessionYP_001326836 
Protein GI150396369 
COG category[S] Function unknown 
COG ID[COG3827] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.775258 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAGC TCAACGTCGC ACGCGAACCT TCGATGGATG AGATTCTGGC ATCCATTCGC 
AAGATCATCG AGAGTAACGA GCCTGGGCCG ACCGGAACCT CCATGCGGCA GAGTTTCGAG
GACGACGGCG GCGATGATGC CGATCATTCG ATCGATTCCG AGACAGAAGC GAACGATTTC
GGTTCCATTG AAGATCGATT TTCCGCCGTG GGGTCGTCAC AATCGGTGGC CGAAACCCGT
ACCGGCTCAT CACTGTCCTC GACTGCGCCG CTTTCGCTTG CAGATGTTGC GGCAAGGGTG
AGGGCGGCGT CCGAGCGGCA GGCGGTGCAT ACGCCACAGA GAGAGCAAAC AGGGGGAGCG
GATGCGCGTT CGCCAGAGGA TAGCCCTGTG ATTTCACGCG TTGCGGCGTT CCCTTCTTCG
GCTGCCCTCG CGTCGAATGC GGCCACAGGA GGTTCTGTGA GCCGCTTCCC GGCGCATGGC
GACCCGGCCC CTGCAACCGG GGAGCCGGCA GTGGATGCGC ATGCGGCCGC ACCGGAAGAG
CCAGCCGAGC CGGAAAGCGC GCCAGGCTCG ATCGTTTCCC CGGCTGTCAG CCGCCAGGTG
GCGCGCGCCT TCGACGAACT GGCGCATGCC GTGGAGAACG GTCCTCGCCG TTCCTTCGAC
GAAATCGCCG AGGCGATGCT GCGCCCGATG CTGCAGGAAT GGTTGGACGA CAACCTGCCG
ACTCTGGTGG AGAGACTGGT GCGCGAGGAA ATCGAACGGG TGGCCCGCGG GCCGCGGCGC
TGA
 
Protein sequence
MAQLNVAREP SMDEILASIR KIIESNEPGP TGTSMRQSFE DDGGDDADHS IDSETEANDF 
GSIEDRFSAV GSSQSVAETR TGSSLSSTAP LSLADVAARV RAASERQAVH TPQREQTGGA
DARSPEDSPV ISRVAAFPSS AALASNAATG GSVSRFPAHG DPAPATGEPA VDAHAAAPEE
PAEPESAPGS IVSPAVSRQV ARAFDELAHA VENGPRRSFD EIAEAMLRPM LQEWLDDNLP
TLVERLVREE IERVARGPRR