Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1150 |
Symbol | |
ID | 5321996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1221690 |
End bp | 1222472 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640790091 |
Product | hypothetical protein |
Protein accession | YP_001326836 |
Protein GI | 150396369 |
COG category | [S] Function unknown |
COG ID | [COG3827] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.775258 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGCAGC TCAACGTCGC ACGCGAACCT TCGATGGATG AGATTCTGGC ATCCATTCGC AAGATCATCG AGAGTAACGA GCCTGGGCCG ACCGGAACCT CCATGCGGCA GAGTTTCGAG GACGACGGCG GCGATGATGC CGATCATTCG ATCGATTCCG AGACAGAAGC GAACGATTTC GGTTCCATTG AAGATCGATT TTCCGCCGTG GGGTCGTCAC AATCGGTGGC CGAAACCCGT ACCGGCTCAT CACTGTCCTC GACTGCGCCG CTTTCGCTTG CAGATGTTGC GGCAAGGGTG AGGGCGGCGT CCGAGCGGCA GGCGGTGCAT ACGCCACAGA GAGAGCAAAC AGGGGGAGCG GATGCGCGTT CGCCAGAGGA TAGCCCTGTG ATTTCACGCG TTGCGGCGTT CCCTTCTTCG GCTGCCCTCG CGTCGAATGC GGCCACAGGA GGTTCTGTGA GCCGCTTCCC GGCGCATGGC GACCCGGCCC CTGCAACCGG GGAGCCGGCA GTGGATGCGC ATGCGGCCGC ACCGGAAGAG CCAGCCGAGC CGGAAAGCGC GCCAGGCTCG ATCGTTTCCC CGGCTGTCAG CCGCCAGGTG GCGCGCGCCT TCGACGAACT GGCGCATGCC GTGGAGAACG GTCCTCGCCG TTCCTTCGAC GAAATCGCCG AGGCGATGCT GCGCCCGATG CTGCAGGAAT GGTTGGACGA CAACCTGCCG ACTCTGGTGG AGAGACTGGT GCGCGAGGAA ATCGAACGGG TGGCCCGCGG GCCGCGGCGC TGA
|
Protein sequence | MAQLNVAREP SMDEILASIR KIIESNEPGP TGTSMRQSFE DDGGDDADHS IDSETEANDF GSIEDRFSAV GSSQSVAETR TGSSLSSTAP LSLADVAARV RAASERQAVH TPQREQTGGA DARSPEDSPV ISRVAAFPSS AALASNAATG GSVSRFPAHG DPAPATGEPA VDAHAAAPEE PAEPESAPGS IVSPAVSRQV ARAFDELAHA VENGPRRSFD EIAEAMLRPM LQEWLDDNLP TLVERLVREE IERVARGPRR
|
| |