| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1137 |
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| Symbol | |
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| ID | 5321983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1204850 |
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| End bp | 1205974 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640790078 |
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| Product | putative membrane-associated zinc metalloprotease |
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| Protein accession | YP_001326823 |
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| Protein GI | 150396356 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.615392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTTC TGCTTGACAA TCTTCAGTAC ACGATCCCCA CGTTCCTGTT CCTCCTGACG
TTGCTGGTCT TCGTTCACGA GATGGGACAC TACCTGGTGG GCCGCTGGTC GGGCATTCGC
ATCCTGGCCT TTTCCGTTGG CTTCGGACCC GAACTCTTCG GCTGGACCGA CCGTCACGGC
ACCCGCTGGA AATTCTGTGC GATCCCGCTC GGCGGCTATG TGAAGTTCTT CGGCGACGAA
GACGCCGCGA GCACGCCCGA CTACCGGCGG CTCGAAACGA TCGCGCCGGA AGAGCGTGGC
CGGACATTCC TGGGCGCAAA GCTCTGGAAG CGCGCGGCGA CTGTCGCGGC CGGGCCGATC
GCGAACTTTC TTCTGGCAAT TGCGATCTTC GCCGTCCTCT TTTCCATTTA CGGCCGTGCC
GTCGCCGATC CCGTCGTCGC TTTCGTCGCG CCGGGCAGTG CCGCGGAAAA GGCAGGGGTC
CTGCCCGGAG ACAGGCTGTT GTCGATCGAC GGAGAGCCGA TCGCTACCTT TGACGACGTG
CGCCGATATG TGAGCGTCCG CCCCGAACTG CCGATCACCG TTCGAATCGA GCGCGAGGGC
GCTGCGATCG ACGTGCCGAT GGTGCCGCAG CGCACCGAAT CCGTCGATCC CCTTGGCAAT
AAAATGGAAG AGGGCAAGAT CGGCATCGGC ACGAACCAGG AGGCCGGCAA TTTCCGGGTC
GAGACCTACG GACCTGTGGA GGCCGTGGGA CAAGGGGCAC TGCAGAGCTG GCGAATCGTA
ACCGGCACGC TCGACTATCT CTCGAATCTC TTTGTCGGCC GCATGAGCGC CGACCAGGTC
GGCGGACCGA TTCGTATCGC GCAGATGTCC GGCCAGATGG CGAAGCTCGG CATTGCCGAG
GTGCTGAATT TCGCGGCCGT GCTTTCGGTT TCCATTGGAT TGCTTAATCT CATGCCCGTG
CCGGTGCTTG ATGGCGGCCA CCTGATGTTC TATGCCGTCG AAGCGTTGCG CGGCAGGCCG
GTGGGTCCCG CCGCCCAGGA TCTCGCATTT CGCATCGGCT TTGCCATGGT GCTCATGCTG
ACGGTTTTTG CGGCCTGGAA CGATATCAAC TGGCTCTTCG GATAG
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| Protein sequence | MSLLLDNLQY TIPTFLFLLT LLVFVHEMGH YLVGRWSGIR ILAFSVGFGP ELFGWTDRHG
TRWKFCAIPL GGYVKFFGDE DAASTPDYRR LETIAPEERG RTFLGAKLWK RAATVAAGPI
ANFLLAIAIF AVLFSIYGRA VADPVVAFVA PGSAAEKAGV LPGDRLLSID GEPIATFDDV
RRYVSVRPEL PITVRIEREG AAIDVPMVPQ RTESVDPLGN KMEEGKIGIG TNQEAGNFRV
ETYGPVEAVG QGALQSWRIV TGTLDYLSNL FVGRMSADQV GGPIRIAQMS GQMAKLGIAE
VLNFAAVLSV SIGLLNLMPV PVLDGGHLMF YAVEALRGRP VGPAAQDLAF RIGFAMVLML
TVFAAWNDIN WLFG
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