Gene Smed_1124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1124 
Symbol 
ID5321970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1192640 
End bp1193458 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content59% 
IMG OID640790065 
Producthypothetical protein 
Protein accessionYP_001326810 
Protein GI150396343 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.595917 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCGTA AAGGCTTCGG TCTTGTCACT CTGGGAAGTG TCTGTGTCGT CGTCATGACG 
GCGGGCGCCG CACAGGCCAG TGCGCTCGTT CCCCATCGCG CGGTCTACGA TCTGGAATTG
AAGGACGCCT CCGAGCGCTC CGGCATCTCC GGAATGTATG GGCGCATGGT CTATGAGTTC
AACGGCTCCG CCTGCGAGGG CTACACCGTC AGCTTCCGCT TCGTCACCCA GGTCGATACG
GGCGACGAAG TTCGCCTTAC CGATCAGCAG ACCACCACCT ACGAGGACAT GAAGAACGGA
AATTTCCGTT TCCTCACCCG ATCATTCACC GATGAGAAGC TGGACAAGGA AGTACGCGGC
AGCGCGCATG ACGAAAAATC GGGCGTCAAA GTCGAACTGA CCGCGCCCGA CAAGCGTCAG
GTGGCACTTG CGGCAAGCCG TTTTCCGACC GAGCATATGC TGGAGGTGAT CGAACGGGCA
AAAAAGGGGG AGACGTTTTT CGAGGCGCGC ATCTTCGATG GTTCCGATTC CGGCGACAAG
ACGCTGATTA CGTCGACCTT CGTCGGCAAG CCGCGCAAAC CGGCGCCCGG CGACGTTGAT
GTCGGCAAGG CCGGCAAGCT CGGGGAAGAG AGCTATTGGC CCGTGACGAT CGCCTATTTC
ACCGACGAAG CGAGCGGTGA TGCCCTGCCT GTATATCGCA TGTCCTTCAA ACTCTATGAA
AACGGCGTGA CGCGCGACCT TACCATGGAT TACGGAGACT TCGCCCTGAG TGGCAAACTC
GCCGAGCTCG AGGTCTTCGA CACCGCAGAG TGCAAGTAA
 
Protein sequence
MFRKGFGLVT LGSVCVVVMT AGAAQASALV PHRAVYDLEL KDASERSGIS GMYGRMVYEF 
NGSACEGYTV SFRFVTQVDT GDEVRLTDQQ TTTYEDMKNG NFRFLTRSFT DEKLDKEVRG
SAHDEKSGVK VELTAPDKRQ VALAASRFPT EHMLEVIERA KKGETFFEAR IFDGSDSGDK
TLITSTFVGK PRKPAPGDVD VGKAGKLGEE SYWPVTIAYF TDEASGDALP VYRMSFKLYE
NGVTRDLTMD YGDFALSGKL AELEVFDTAE CK