Gene Smed_1103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1103 
Symbol 
ID5321949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1173034 
End bp1173846 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content59% 
IMG OID640790044 
Productoxidoreductase FAD-binding subunit 
Protein accessionYP_001326789 
Protein GI150396322 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.566405 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCTC CGGCAAAAAA AGAAGATTTC GCGGTACAGG CTCCGGCAGG TGTCTTCGTT 
GAAACGGTGA CGAGCGTCGA ACATTACACC GACCGGCTCT TCCGCTTCCG CATGACACGC
CCGAAGGAGT TCCGTTTCCG TTCGGGCGAA TTTGCGATGA TCGGCCTGAT GGTTGGCGAC
AAGCCGATTT ATCGTGCCTA CTCGATCGCG AGCCCGGCTT GGGACGAGGA ATTGGAGTTC
TTCTCGATCA AGGTGCCCGA TGGGCCGCTG ACGTCGCATC TGCAGGGAAT CAAGCCCGGC
GACCAGGTGC TGATGCGCAA GAAGCCGACG GGCACACTGG TGCTGGACGC GCTCGTGCCC
GGACGCAGGC TCTATATGTT CTCGACCGGC ACAGGTATTG CGCCCTTTGC GAGCCTGATC
CGCGACCCGG AAACTTTCGA GAAGTTCGAA GAGGTCATCC TCACCCATAC GTGCCGCGAC
GTGGCGGAGC TGAAATACGG CTTCGATCTT GTCGACGAAA TCCGCAATCA CGAGTTCCTG
AACGAGGTCG TCGGCAATAA GCTCCGGCAC TATGCGACGG TGACGCGTGA GGATTATTCT
TACAAAGGCC GGATTACCGA CCTGATGAAC AACGGCAAGT TCTTCGCCGA CCTCGGCCTG
CAGCCGCTCG ATCCCGTGAT CGACCGCGGC ATGATCTGCG GTTCGACGGC CATGCTGAAG
GACACCAAGG AGATCCTCGA AGCCGCTGGC CTGACGGAAG GTGCCAACAA CAAGCCGGCC
GAGTTCGTCA TCGAACGCGC ATTCGTTGGC TGA
 
Protein sequence
MNAPAKKEDF AVQAPAGVFV ETVTSVEHYT DRLFRFRMTR PKEFRFRSGE FAMIGLMVGD 
KPIYRAYSIA SPAWDEELEF FSIKVPDGPL TSHLQGIKPG DQVLMRKKPT GTLVLDALVP
GRRLYMFSTG TGIAPFASLI RDPETFEKFE EVILTHTCRD VAELKYGFDL VDEIRNHEFL
NEVVGNKLRH YATVTREDYS YKGRITDLMN NGKFFADLGL QPLDPVIDRG MICGSTAMLK
DTKEILEAAG LTEGANNKPA EFVIERAFVG