| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1087 |
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| Symbol | ispDF |
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| ID | 5321933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1154196 |
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| End bp | 1155410 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640790028 |
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| Product | bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein |
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| Protein accession | YP_001326773 |
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| Protein GI | 150396306 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCCG AAGAACAGTT CTCCTGCGGT GTCATTGTCG TCGCGGCCGG CCGCGGCGAG
CGCGCCGGTC AGTCGAGCGA GGGGCCGAAG CAATATCGCA CGGTCGGCGA TCGCCCGGTT
ATCACTCATA CGCTTGACGT TTTTGCGACA TGGGACGGAA CGGGACCTGT CGTCGTCGTG
ATTCACCCCG AGGATGAAGA GCTCTTCGCG TCTGCCCGCA AGCGGATGGG CCATATGCTG
GACCTTACGG TGGTACATGG CGGGGCGACT CGCCAGCTGT CGGTTCTGGC CGGACTGCAA
GCGATCGCCG GCGCCGGGGT AAAACATGTC ATGATCCACG ACGCAGTGCG CCCGTTCTTC
GACCATGCCC TTCTCGATCG CTGTCGGGCG GCGCTGCGGA ACGGCGCGGG GGCGGTCCTG
CCGGCCGTTG CGGTCGCCGA CACCCTGAAA CGCGCGCAAG CCGGCGGCCT CGTCGCCGAA
ACCGTACCGA GAACCGATCT CCATGCCGCC CAGACGCCGC AGTGCTTCCG CCTCGAGGCG
ATCCTCTCCG CTCACCGGCA AGCGGCGGCA AGCGGCCAAG CGGATTTTAC CGACGACGCC
TCAATCGCCG AATGGGCCGG TATTCCGGTC CATCTGGTGG AAGGCTCGCC GGACAACTTC
AAGTTGACGC TCCGGAGGGA CCTGTCGATG GCAGATGAGA AACTGACGCG CATGGCAATC
CCTGATGTGC GTACCGGAAA CGGATATGAC GTGCATCAAC TCGTCGAGGG TGACGGCGTC
ACGCTCTGCG GCGTGTTCAT TCCCCATGAT CGCAAGCTCT CGGGTCATTC CGACGCGGAT
GTAGCGCTCC ATGCCTTGAC GGACGCCCTG CTTGCCACCT GCGGCGCCGG CGACATCGGC
GACCACTTCC CGCCGTCCGA TCCGCGGTGG AAGGGCGCGC CTTCGCACAT TTTCCTCGAA
CATGCCGCAC GGATCGTCCG CGAGCGTGGC GGCACTATCA CCCATGCGGA TATATCGCTG
ATCGCCGAGG CGCCCAAGGT CGGTCCGCAC CGTCAGCAGA TGCGGGAAAG CCTGTCGGCC
ATGCTCGCGA TTGCGATCGA CCGTTGCTCC GTCAAGGCGA CCACCAACGA GAAACTCGGC
TTCGTCGGCC GCAACGAAGG CATTGCGGCA ATCGCCACGG CGACGGTCGT GTATGCATCA
GGGGGTGATG CGTGA
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| Protein sequence | MQAEEQFSCG VIVVAAGRGE RAGQSSEGPK QYRTVGDRPV ITHTLDVFAT WDGTGPVVVV
IHPEDEELFA SARKRMGHML DLTVVHGGAT RQLSVLAGLQ AIAGAGVKHV MIHDAVRPFF
DHALLDRCRA ALRNGAGAVL PAVAVADTLK RAQAGGLVAE TVPRTDLHAA QTPQCFRLEA
ILSAHRQAAA SGQADFTDDA SIAEWAGIPV HLVEGSPDNF KLTLRRDLSM ADEKLTRMAI
PDVRTGNGYD VHQLVEGDGV TLCGVFIPHD RKLSGHSDAD VALHALTDAL LATCGAGDIG
DHFPPSDPRW KGAPSHIFLE HAARIVRERG GTITHADISL IAEAPKVGPH RQQMRESLSA
MLAIAIDRCS VKATTNEKLG FVGRNEGIAA IATATVVYAS GGDA
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