Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1086 |
Symbol | |
ID | 5321932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1153699 |
End bp | 1154196 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640790027 |
Product | CinA domain-containing protein |
Protein accession | YP_001326772 |
Protein GI | 150396305 |
COG category | [R] General function prediction only |
COG ID | [COG1546] Uncharacterized protein (competence- and mitomycin-induced) |
TIGRFAM ID | [TIGR00199] competence/damage-inducible protein CinA C-terminal domain |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGCCGG CCGACATCGA GCAGAAGGCG CGCCACATCA TCAGGGATTT CACCGCCCGC GGGCTCAAGC TGGCCACGGC GGAGTCCTGT ACCGGCGGGT TGATTGTCGG TGCATTGACC GAAGTCGCAG GCTCGTCCTC GGTGATCGAC CGCGGCTTCG TCACCTATTC CAACGAAGCG AAGATCGAAA TGCTCGGGGT GGCCGGCGAA ACTCTTGCCG CGCACGGAGC CGTCTCACGC GAGACGGCAG TGGAGATGGC CCTCGGGACG GTGACGAATT CCGCCGCCGA TTTCGCTGTT GCCGTCACGG GTATCGCGGG GCCAAGCGGC GGTTCCGCTG AAAAGCCGGT CGGCCTCGTT CACCTCGCAG CGGCCGGCCG CGACGGCGCG ATGCGACATC GAGAAATGCG CTATGGCGAT CTTGGACGGG AGGCAATTCG GCTTGCCACC GTGCGGACGG CGCTTGATCT GGTCGCTGAA TTGGCTCACG CGCCGTAG
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Protein sequence | MWPADIEQKA RHIIRDFTAR GLKLATAESC TGGLIVGALT EVAGSSSVID RGFVTYSNEA KIEMLGVAGE TLAAHGAVSR ETAVEMALGT VTNSAADFAV AVTGIAGPSG GSAEKPVGLV HLAAAGRDGA MRHREMRYGD LGREAIRLAT VRTALDLVAE LAHAP
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