Gene Smed_1086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1086 
Symbol 
ID5321932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1153699 
End bp1154196 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content65% 
IMG OID640790027 
ProductCinA domain-containing protein 
Protein accessionYP_001326772 
Protein GI150396305 
COG category[R] General function prediction only 
COG ID[COG1546] Uncharacterized protein (competence- and mitomycin-induced) 
TIGRFAM ID[TIGR00199] competence/damage-inducible protein CinA C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCCGG CCGACATCGA GCAGAAGGCG CGCCACATCA TCAGGGATTT CACCGCCCGC 
GGGCTCAAGC TGGCCACGGC GGAGTCCTGT ACCGGCGGGT TGATTGTCGG TGCATTGACC
GAAGTCGCAG GCTCGTCCTC GGTGATCGAC CGCGGCTTCG TCACCTATTC CAACGAAGCG
AAGATCGAAA TGCTCGGGGT GGCCGGCGAA ACTCTTGCCG CGCACGGAGC CGTCTCACGC
GAGACGGCAG TGGAGATGGC CCTCGGGACG GTGACGAATT CCGCCGCCGA TTTCGCTGTT
GCCGTCACGG GTATCGCGGG GCCAAGCGGC GGTTCCGCTG AAAAGCCGGT CGGCCTCGTT
CACCTCGCAG CGGCCGGCCG CGACGGCGCG ATGCGACATC GAGAAATGCG CTATGGCGAT
CTTGGACGGG AGGCAATTCG GCTTGCCACC GTGCGGACGG CGCTTGATCT GGTCGCTGAA
TTGGCTCACG CGCCGTAG
 
Protein sequence
MWPADIEQKA RHIIRDFTAR GLKLATAESC TGGLIVGALT EVAGSSSVID RGFVTYSNEA 
KIEMLGVAGE TLAAHGAVSR ETAVEMALGT VTNSAADFAV AVTGIAGPSG GSAEKPVGLV
HLAAAGRDGA MRHREMRYGD LGREAIRLAT VRTALDLVAE LAHAP