| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1062 |
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| Symbol | |
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| ID | 5321908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1129087 |
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| End bp | 1131147 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640790005 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_001326750 |
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| Protein GI | 150396283 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.388156 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGACA GCAGCGACCT ATTTTCCGCC ATGCCCCAAC AGCCGAAGCC GGCGGATGCC
GCGCCACGCA AACCCGCGGC CGCAGCCGCC GGTAACGAGG CGCCGCGCCC TGCCCCGAGG
ACAAGCGACG GCAGCGACTA CGACGCCTCG GCGATCGAGG TGCTGGAAGG ACTGGAGCCG
GTACGGCGGC GTCCGGGCAT GTATATCGGC GGAACGGACG AAAAGGCCCT GCATCACCTG
TTTGCCGAGG TCATCGACAA CTCGATGGAC GAGGCGGTCG CGGGACATGC GAACTTCATC
GACGTGAACC TGGATGCGGA CGGTTTCCTG ACGGTCACCG ATAACGGCCG CGGCATACCG
GTCGAAAACC ACCCCAAATT TCCCGGCAAG TCCACGCTCG AAGTAGTGAT GACGGTGCTG
CATGCCGGCG GCAAGTTCGA CGGTAAGGCC TACGAGACCT CCGGTGGACT GCACGGTGTC
GGTGTTTCGG TCGTCAACGC ATTGTCCGAT GACCTCGAAG TCGAGGTCGC ACGCAATCGG
CGTCTTTATC GCCAACGCTT CTCCCGAGGC GTCGCGCAAG GAGGTCTCGA AGACCTCGGC
GACGTGCACA ATCGCCGCGG CACCAGGGTC CGCTTCCACC CGGATCCGCA GATCTTCGGT
CCGCATGCCC GCTTCGAGCC GGCTCGGCTT TTCCGTATGG CCCGGTCGAA GGCCTATCTC
TTCGGCGGCG TCGAAATCCG CTGGTCCTGC GACCCGTCGC TCCTGCCGGA GGGTTCGGAG
ATTCCGGACA GGGCCGTTTT CCACTTCCCC GGCGGCCTCA AGGATTATCT CGCCGCTACG
CTCGGAAAGG AATTCACGGT TACGCGCGAG ATTTTCGCGG GCAAGTCGGA AAAATCCAAC
GGCCACGGCT CGCTCGAATG GGCCGTCACC TGGTATGGCG GCGACCAGCA GATCCATTCC
TACTGCAATA CGATCCCGAC GCCCGAAGGA GGGACGCACG AAGCGGGTCT TCGCATCGCG
CTGACGAAGG GGCTCAAGAA CTATGCCGAG CTCACGCAGA ACAAGCGCGC TGCGATCGTC
ACCACCGACG ACGTGATGAT TTCCGCGGCG GGCATGCTCT CCGTCTTCAT TCGCGAACCG
GAATTCGTCG GTCAGACGAA AGACAGGCTT GCGACGGTGG AAGCGCAGCG CATAGTCGAA
AACGCGCTTC GCGACCCCTT CGACCACTAT CTCGCTGACA ACCCGGCGGA AGCGGCAAAA
CTTCTCGACT GGGTGGTGGA GCGAGCCGAG GAGCGCGTTC GCCGGCGCAA GGAAAAAGAA
GTCAGCCGCA AGACGGCCGT GCGCAAGCTG CGTCTGCCGG GCAAGCTCGC CGATTGTGCG
CAGAACACGG CGGAGGGCGC CGAACTCTTC ATCGTCGAAG GCGACTCGGC CGGCGGCTCG
GCCAAACAGG CTCGCAACCG CGCCAACCAG GCGATCCTGC CGCTGCGCGG CAAGATCCTC
AACGTCGCCA GTGCCGGCCG CGAGAAGCTC GGTGCGAACC AGCAGATCGG CGATCTCATC
CAGGCCCTCG GCTGCGGGAC CCGTTCGAAA TATCGCGAAG AGGACCTGCG CTACGAGCGC
ATCGTCATCA TGACAGACGC CGATGTCGAC GGCGCGCATA TCGCTTCGCT CCTGATCACC
TTCTTCTACC AGGAAATGCC GGAGCTCATC CGCGGCGGCC ATCTCTTTCT CGCCGTGCCG
CCGCTCTACC GGCTGAGCCA GGGCTCGAAG ACGCTCTATG CCCGCGACGA CGCGCATCGC
GAAGAGCTGA TGCAGACGGA GTTCAGCGGC CGCGGCAAGG TCGAAATCGG ACGATTCAAA
GGTCTCGGCG AGATGCTGCC CGCGCAGCTC AAGGAAACCA CCATGGATCC GGCCAAGCGG
ACGCTCCTCA AGGTCGAAAT CGATGATGTG GATTTCGAGG GCACCCGTGA TGCGGTCGAC
AGCCTGATGG GAACGAAAGC CGAGGCCCGC TTCCGTTTCA TCCAGGAGCG TGCCGTCTTC
GCGGAAAATC TCGATATTTG A
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| Protein sequence | MDDSSDLFSA MPQQPKPADA APRKPAAAAA GNEAPRPAPR TSDGSDYDAS AIEVLEGLEP
VRRRPGMYIG GTDEKALHHL FAEVIDNSMD EAVAGHANFI DVNLDADGFL TVTDNGRGIP
VENHPKFPGK STLEVVMTVL HAGGKFDGKA YETSGGLHGV GVSVVNALSD DLEVEVARNR
RLYRQRFSRG VAQGGLEDLG DVHNRRGTRV RFHPDPQIFG PHARFEPARL FRMARSKAYL
FGGVEIRWSC DPSLLPEGSE IPDRAVFHFP GGLKDYLAAT LGKEFTVTRE IFAGKSEKSN
GHGSLEWAVT WYGGDQQIHS YCNTIPTPEG GTHEAGLRIA LTKGLKNYAE LTQNKRAAIV
TTDDVMISAA GMLSVFIREP EFVGQTKDRL ATVEAQRIVE NALRDPFDHY LADNPAEAAK
LLDWVVERAE ERVRRRKEKE VSRKTAVRKL RLPGKLADCA QNTAEGAELF IVEGDSAGGS
AKQARNRANQ AILPLRGKIL NVASAGREKL GANQQIGDLI QALGCGTRSK YREEDLRYER
IVIMTDADVD GAHIASLLIT FFYQEMPELI RGGHLFLAVP PLYRLSQGSK TLYARDDAHR
EELMQTEFSG RGKVEIGRFK GLGEMLPAQL KETTMDPAKR TLLKVEIDDV DFEGTRDAVD
SLMGTKAEAR FRFIQERAVF AENLDI
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