Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1056 |
Symbol | |
ID | 5321902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1124754 |
End bp | 1125341 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640789999 |
Product | nitroreductase |
Protein accession | YP_001326744 |
Protein GI | 150396277 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.545888 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCG AAATAAAGCT TGTCGATTAT CTTGCATGCC GCAGATCCAT TCCAGCCTTC CAGATGGGCG AGCCGGGACC GGGCAGGGCA GAGGTCGAGG AGATGCTGAA GCTGGCGTCA CGCGCCCCCG ATCACGGCAA ACTGGCTCCG TGGCGCTTCA TCGTCTATCG GGGCGAGGAA AGGGCGCGCA TCAGCGCCGA ACTGAAGAAA ATGGCCCTTG CCGCCAAGCC GGACATGCCG GACGAGATGA TCAAGGTCGA GGAGACCCGG CTTACGCGCG CACCCGTCGT CGTCGCCGTG GTCAGCAAGG CGGCGCCGCA TTTCAAGATC CCCGAATGGG AGCAGCAGAT GTCGGCCGGA GCCGTTTGCC TCAATCTGCT GATGGCCGCG AATGCCCTTG GCTTTGCTTC GAACTGGCTG ACGGAATGGT ATGCCTTCGA TGAGCGGGCC TACCCGCTTC TCGGCGTGGC ACCGGGGGAG AGGATCGCAG GCTTCATTCA CATCGGTACG GCCATGGTAC CGCCGACGGA GCGGCCCCGG CCCGAACTCG AGGAAATCGT CACCTGGGTC GGAAAGGGGG ATGATTGA
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Protein sequence | MKTEIKLVDY LACRRSIPAF QMGEPGPGRA EVEEMLKLAS RAPDHGKLAP WRFIVYRGEE RARISAELKK MALAAKPDMP DEMIKVEETR LTRAPVVVAV VSKAAPHFKI PEWEQQMSAG AVCLNLLMAA NALGFASNWL TEWYAFDERA YPLLGVAPGE RIAGFIHIGT AMVPPTERPR PELEEIVTWV GKGDD
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