| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1018 |
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| Symbol | |
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| ID | 5321863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1088694 |
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| End bp | 1089359 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640789960 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001326706 |
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| Protein GI | 150396239 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.76802 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTCG TCCTCTTTGA TTGCGACGGG ACGCTCGTCG ACAGCGCAGG GCTCATTCAC
GAAGTGATGG CCCGCACCTT CGAGGCTTTC GACGAGGAGC GCCCGACATC GGACGCGACC
AAGGCGATCA TCGGCCTCAC ACTGGATATT GCAATTGCCC GGCTCCTGGG ACAGGAGCAC
GTCGACAGCC GGGCGACCGC AATGACGGCG CATTACAAAT CTATATTCGC GTCAGTGCGT
GGCGAACCAG GCTGTAGCGA AGCTTTGTTC CCGGGAATTG CGGAGATGAT GAAGATCCTG
GCTGGCCGTG ATGAATTGCT GATCGGTGCC GTCACCGGCA AATCGAGGCG AGGGCTGACG
CATATCGCGG CGACGCACGG CTTCGACAGG ATTTTCTTCG TCTCCCGCAC GGCGGACGAC
TGCCCATCCA AGCCGCACCC GGCCATGGTA ACGGAGTGCT GCGACGAAGC CGGTGTCGCC
CCGCGCGACA CGATCGTGAT CGGAGACGCG ATCTACGACA TGCAGATGGC GAAGGCCGCG
GGCGCGGATG CTCTGGGCGT GGCCTGGGGT TACGCCAGCG TTCCCGAGTT GATGGCCTCC
GGCGCGGACC ATATCGCCCG CGTGCCGACC GACATAATCG AGTGGATAGA CGTTAACCAT
GCCTGA
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| Protein sequence | MKLVLFDCDG TLVDSAGLIH EVMARTFEAF DEERPTSDAT KAIIGLTLDI AIARLLGQEH
VDSRATAMTA HYKSIFASVR GEPGCSEALF PGIAEMMKIL AGRDELLIGA VTGKSRRGLT
HIAATHGFDR IFFVSRTADD CPSKPHPAMV TECCDEAGVA PRDTIVIGDA IYDMQMAKAA
GADALGVAWG YASVPELMAS GADHIARVPT DIIEWIDVNH A
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