Gene Smed_0988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0988 
SymbolrplW 
ID5321833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1069632 
End bp1069925 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content59% 
IMG OID640789930 
Product50S ribosomal protein L23 
Protein accessionYP_001326676 
Protein GI150396209 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0089] Ribosomal protein L23 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.137365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.02544 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGATC TTCGCCACTA CGACGTGATC GTGTCTCCCT CGATCACTGA AAAGTCGACG 
CTGGTCTCCG AACAGAACCA GGTCGTCTTC AATGTCGCCA AGGGTGCTTC GAAGCCTGAG
ATCAAGGCTG CCGTCGAAGC GCTGTTCGGC GTGAAGGTTA CGGCCGTGAA CACGCTCGTC
CGCAAGGGCA AGCTGAAGCG CTTCCGCGGC TTCGCCGGAA AGCAGAAGGA CGTGAAGAAG
GCGATCGTTA CGCTCGCCGA CGGTCAGTCC ATCGACGTTT CCACCGGTCT CTAA
 
Protein sequence
MTDLRHYDVI VSPSITEKST LVSEQNQVVF NVAKGASKPE IKAAVEALFG VKVTAVNTLV 
RKGKLKRFRG FAGKQKDVKK AIVTLADGQS IDVSTGL