Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0941 |
Symbol | |
ID | 5321782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1018182 |
End bp | 1018679 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640789881 |
Product | Holliday junction resolvase-like protein |
Protein accession | YP_001326631 |
Protein GI | 150396164 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) |
TIGRFAM ID | [TIGR00250] RNAse H-fold protein YqgF |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.22726 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTATTC TTACGATCGA GGAACTGGCC GAACGGTTGC CGCCATACCA GGCGGTGGCG GGCCTGGACC TCGGAACGAA AACGATCGGC CTTTCGGTTT CGGATCTCGG GCGGCGCTTT GCGACGCCGC GTGACGTGAT CCGCCGCGTC AAGTTCGGCA TCGACGCGCA AGCGCTCCTC TTTTTTGCGG AAAAGGAAAA GGTCGCGGCC TTCGTTATCG GCCTGCCCGT CAATATGGAC GGCTCGGAGG GGCCGCGCTG CCAGGCCACC CGTGCATTCG TACGCACGAT GGGGGAAAGG ACGGATATTC CCTCCGTCCT CTGGGACGAG CGTCTGTCGA CGGTCGCCGC GGAACGGGTG TTGATCGAGA TGGACGTCTC CCGGAAAAAG CGAGCCGATC GCATCGACTC GGCCGCCGCA TCCTTCATTC TTCAGGGAGC ACTGGATAGA TTGGCATTGC TGGCGAGAGG CGCTTCCGGC GATCGCGACG CGCCGTAA
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Protein sequence | MAILTIEELA ERLPPYQAVA GLDLGTKTIG LSVSDLGRRF ATPRDVIRRV KFGIDAQALL FFAEKEKVAA FVIGLPVNMD GSEGPRCQAT RAFVRTMGER TDIPSVLWDE RLSTVAAERV LIEMDVSRKK RADRIDSAAA SFILQGALDR LALLARGASG DRDAP
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