| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0938 |
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| Symbol | |
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| ID | 5321779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1016628 |
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| End bp | 1017563 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640789878 |
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| Product | auxin efflux carrier |
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| Protein accession | YP_001326628 |
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| Protein GI | 150396161 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0679] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.451063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.354086 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCG TCTTCGAAAG CATTCTGCCG GTCTTCCTGC TCGTGCTCCT CGGGGTCGCG
CTCCGCCGGT CGACACTTGT CGACCAGGGC ATGTGGGTCG GGCTCGAACA GTTCGGCTAT
TATTTTCTCT TCCCCGCCCT GCTCTTCTCG ACTTTGGCGA AGGCTGATCT GGCGGGATTG
GAGGTCGACG CGACGGCAGT TGCGACTGTC GGTAGCGTGA CATTGATGTC TGCGGCCCTT
CTCTCGACCT GGCCCCTCCT GCGTAAGGGC GGGATTCCGG CCGCCACCTT CACATCGATC
TTTCAGACGG CCACGCGCTG GAATGCTTTC ATTGCACTGG CGGTCGCCGA AAAACTCTTC
GGTGCGATCG GCCTCAGTCT GACGGCCCTC ATAATGGCGC TGCTCATCAT CCCGATCAAT
TTCTTCAATA TTGCTGTTCT GACCTGGTTC GGCGGCGCCG GCCGCGGAAT CGGGTTTTTC
TTTTTGAAGA TCGTCACCAA TCCGCTGATC ATCTCTTCGG CGCTCGGAAT AGCATTCAAT
CTTACCGGCC TTGAGCCCTA TGACCCGGTG ATGACGGCGA TCGATATGCT GGCGAGCGCC
TCGCTCGGGC TCGGGCTGAT CCTGGTCGGC GCCGGGCTCA AGGTCGCCGA CACCCTGACG
CCGAGCGTGC CCGCACTTCT CGCGGTCGCC CTAAAGCTGA TCGTCATGCC AATGTTCATG
GTCGGTGGAA GCGTGCTCCT CGGCATACGG GGCGATGCCC TGCTCGTCAT CGCCGTGGGC
GCGGCCGTCC CGACCGCCAT GAACGGCTAT CTCCTGGCCA AGCAAATGGG AGGTGATGCA
GGGCTTTACG CTTCCGTCGC GACGATCCAG ACCGCGGCTT CGTTCGTGAC CATACCGCTC
GTGCTTCTCA TTACCGGCTA TGTTGCGGCC GGATAA
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| Protein sequence | MTIVFESILP VFLLVLLGVA LRRSTLVDQG MWVGLEQFGY YFLFPALLFS TLAKADLAGL
EVDATAVATV GSVTLMSAAL LSTWPLLRKG GIPAATFTSI FQTATRWNAF IALAVAEKLF
GAIGLSLTAL IMALLIIPIN FFNIAVLTWF GGAGRGIGFF FLKIVTNPLI ISSALGIAFN
LTGLEPYDPV MTAIDMLASA SLGLGLILVG AGLKVADTLT PSVPALLAVA LKLIVMPMFM
VGGSVLLGIR GDALLVIAVG AAVPTAMNGY LLAKQMGGDA GLYASVATIQ TAASFVTIPL
VLLITGYVAA G
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