| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0772 |
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| Symbol | |
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| ID | 5321609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 830628 |
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| End bp | 833291 |
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| Gene Length | 2664 bp |
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| Protein Length | 887 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640789709 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001326463 |
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| Protein GI | 150395996 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0989084 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGTGG TGGCTGTGGA CGTAGATTCT TCGATGTCGC CGATGAGTGT CGCAAGTCTG
GCCGCGCGGG GCGAGAGGCC GGCGCTGCTG CTGCGCGGCG GGAGCATCAT CACCTATCGC
GAACTGGCGC AGCGCGTCGG CCGCCTTGCA TCGCAATGGC GCGGCGGCCG CGGTCTCGTT
ATGCTCGAGG CCGAGCTTTC CGATCACTCT ATCGTCGGCT ATCTCGCCGC GCTCGAAGCG
GGGCACGCGG TTGCCCTGTG CGCCGGCGCA TCGATGGTCA CGGCTCGTGA AGTTTTCAAT
CCGGAATACT GCTATCGCCG TTGCGACGGC CGCTGGCGTA TGGAACGCCT GGACACAGAT
CCGGTCGATC CACACCCGCA ACTCGCCGTC CTGCTCTCGA CTTCCGGGAG TACCGGCTAT
GGCAAATGCG TGCGGCTGTC TTATGCGAAC ATTCAGTCCA ACGCACTGTC TATCGCCGGA
TATCTCGGCT TGAGCGCATC GGACCGAGGC TGTTTGACCC TGCCGCTTCA TTATTCCTAC
GGACTTTCGA TTCTGAACAC TCACCTGTCT GTGGGCGCGA GCGTCTATCT GCCCGGCAGT
TCAATTTCAG ACGACGGCTT CCTCGACGAT CTTGCGGAGA GCGGCAGTTC CAGTTTCACC
GGCGTACCCT ATTCCTATGA CCTCTTGGAA AAGGTGGGTT TCCGCGAACG CGATTTCCCT
AAGCTTCGCT TCATGACGGT CGCCGGAGGA CGAATGTCGC CGGAACTCGT CCGCCGTTAC
GATGAACATC TTTCGGCGCG CGGCGCGTCT TTTTTCGTGA TGTATGGTCA AACCGAGGCA
ACCGCCCGGA TGGCCTACAT GCCGCCGGAA AGTCTGCGAG GCAGAGAGGA TCGCATCGGC
ATCGCCATAC CGGGCGGCAG CCTGACGATC GTCGACGAAG AAGGCAGGAC CATCCAGGCC
GCCGATCAGG CGGGCGAACT CGTCTATCGC GGGCCGAACG TGATGATGGG CTATGCCTCG
TCGCGCGCCG ATCTCGCAAG GGGTGCCGAG TTGTCGGAAC TGCGGACCGG CGATCTCGCC
TCCAGGGATG CCGAAGGCTA TTTCCGGATC GTCGGACGAA CGAAGCGGCT TTCGAAAATT
GCCGGTCTAC GCATAGGTCA TGACAGCCTG GAAGCCGCCC TCGAACGGCA TGGCATCTCT
GCTGCCGTCG TCGGCAACGA TACCGAGGTC CATGCTTATT ATGCTGGGGA TCGCGATCCG
GAAGAAGTTT GCCGGCTGCT CTTGCAGGCG AGCGGCTTGA CGGCCATGCA GGTCGGGGCT
TCACGCTTGA ATTGCCTTCC GAGGCTGGTA TCGGGAAAAA TCGACTATCA GAGCCTTGCC
GTTCCTCCGG CCGCAACGCA GTGTCGCCGT TTCGAGCGGC AGAGCGTGGA GACTGTTTTC
GCCCGGATAT TCTATCCGAA GAAGATACGG TCGGAGGATA GTTTTCTGTC GCTCGGCGGC
GACTCGCTCC GTTTCGTCCA GCTTTCAATC GGACTTGAAA AAATCCTCGG AGAACTCCCT
GAATCATGGG AGAAATTGCC GATCGGAGAG CTGGCGGCGC GCAGCAGCCG AAAGGGCAAG
ATCGGGCAGA TCGCAACCGA CCTCCTGATC CGGGCCCTGG CGATCATCCT TGTCGTGCTC
CATCATGAGA CGCTTTGGCC GATTCCGGGT GGTTCGGCTG CAATGGTCAT TCTTGCCGGA
TTCAGTCTTG CGCGGTTTCA AAGCGGGGCA TTGTTCTCCG GCGCGATAGA CAAGCTCCTG
TGGCCCCTGG CACAGGTCCT CATTCCATAT TACCTCATCG TAGCGGCTTA CGCGCTCGCC
TGGGGCGAAG TGCCCTGGGC CTCGATCTTT CTCGTCGGCA ATTTCGCTTT TGCCGATCCT
GAGCGGCACA GCATGGTGCC CTATCTCTAT TGGTTCATCG AAGCCTATAG CCAGATGCTG
CTGGTGTTCG GCGCTCTGTT CGCCGTCCCC TCCATTCGAC GGGCGGCGGC AAAGAGGCCT
TTCGCCGCGG GCATGATCCT GTTCGTGGCG GCATTCGCGG CGCGAATGGC CTTTCCACTC
CTCGTCGAGA TCGGCAATCG CCAGGTATTC ACCCTTCCAT GGATCTTCTA CATGGCAGTC
CTGGGCTGGT GTGCGGCCAT AGCCGCAACG TGGAAAGAGA AATCGGCTGT GATGCTCGCG
GGAACGGGTG TTTTCCTGTT TCTAGGACTT TACGAGGGCG TGTGGATTGG TACGAAGATC
AAATATCTGC TGCAGATCAT TGTTCTGGCA GCACTGCTCT TCCTGCCGCG CGTCCGCCTG
CCGCAATGGT CAGCGCGCCT GATCCTGCCG CTTTCTGCCG CAAGTTTCCA TATCTACATA
CTGCACCGTT TCGTGCCGGA ACTGCTGCTG CAACCGATGC AATCCTTGAC GTCGCCCGTC
GTCTTCGCCG TTGCCTCTAT TCTTGGCGGC ATAGCCCTCG GGGCAGCGGC CTGGCTGGTG
CAGCGACAGC TGGTGGCCTG GCTGGCTGCA CGGGAGAGCC GTATCTTGCT CGCCCCGCGA
GACGGGCCCG GCAGCGGTCT CGCGTCAGGC AGCCCACTTT TTGCCGTCGG TCCGCAGGAA
GAATACCAGA TCCAGCGTCA ATGA
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| Protein sequence | MEVVAVDVDS SMSPMSVASL AARGERPALL LRGGSIITYR ELAQRVGRLA SQWRGGRGLV
MLEAELSDHS IVGYLAALEA GHAVALCAGA SMVTAREVFN PEYCYRRCDG RWRMERLDTD
PVDPHPQLAV LLSTSGSTGY GKCVRLSYAN IQSNALSIAG YLGLSASDRG CLTLPLHYSY
GLSILNTHLS VGASVYLPGS SISDDGFLDD LAESGSSSFT GVPYSYDLLE KVGFRERDFP
KLRFMTVAGG RMSPELVRRY DEHLSARGAS FFVMYGQTEA TARMAYMPPE SLRGREDRIG
IAIPGGSLTI VDEEGRTIQA ADQAGELVYR GPNVMMGYAS SRADLARGAE LSELRTGDLA
SRDAEGYFRI VGRTKRLSKI AGLRIGHDSL EAALERHGIS AAVVGNDTEV HAYYAGDRDP
EEVCRLLLQA SGLTAMQVGA SRLNCLPRLV SGKIDYQSLA VPPAATQCRR FERQSVETVF
ARIFYPKKIR SEDSFLSLGG DSLRFVQLSI GLEKILGELP ESWEKLPIGE LAARSSRKGK
IGQIATDLLI RALAIILVVL HHETLWPIPG GSAAMVILAG FSLARFQSGA LFSGAIDKLL
WPLAQVLIPY YLIVAAYALA WGEVPWASIF LVGNFAFADP ERHSMVPYLY WFIEAYSQML
LVFGALFAVP SIRRAAAKRP FAAGMILFVA AFAARMAFPL LVEIGNRQVF TLPWIFYMAV
LGWCAAIAAT WKEKSAVMLA GTGVFLFLGL YEGVWIGTKI KYLLQIIVLA ALLFLPRVRL
PQWSARLILP LSAASFHIYI LHRFVPELLL QPMQSLTSPV VFAVASILGG IALGAAAWLV
QRQLVAWLAA RESRILLAPR DGPGSGLASG SPLFAVGPQE EYQIQRQ
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