| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0749 |
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| Symbol | |
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| ID | 5321586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 803185 |
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| End bp | 804825 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640789686 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_001326440 |
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| Protein GI | 150395973 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACGG TCGGGCTCTA TCTGGTCGAG CTGCTTGCCG CATATGGGGT GGACACAGTG
TTCGGAATCC CCGGCGTGCA TACCGTCGAG ATGTATCGCG GCTTGCCTCG CAGCGGCATC
CGCCATTTCA CCCCGCGCCA CGAACAGGGT GCCGGCTTCA TGGCCGATGG TTATGCCCGA
GCGACCGGGA AGCCCGGAGT GTGCTTCATT ATCTCCGGCC CCGGCCTGAC CAACATCGCC
ACGGCCATGG CCCAGGCCTA CGGGGATTCT GTCCCGATGC TGGTCATCAC GAGCGTCAAT
CCTCCCGGCC GCATGGGTTC GGGCGAAGGA CATCTGCACG AACTTCCGGA CCAACGCCAG
CTTGGCCGCC AGTTCACGGC TTTCAGCCAC ACCATATTGC GGGCGGACGA GCTGGCGCAG
GTCGTCGCCC GCGCCTTTGC CGTCTTCGCT TCGGCCCGGC CGCGGCCGGT GCATATCGAA
CTGCCGGTCG ATCTGCTGAC GGCCGATGCT TCGGCCCTGC CGCCGGCACG GAAGCGTCCT
GTCCCCAGCC GCCCCGCTGC CGAGCCGCAG GCGGTCGCGG CCGCCGCCGC CCTGTGCACG
GCGGCACTGC GGCCGATCAT CCTGGCCGGC GGCGGCGCCG CCGATGCGGC GGTACCTATG
CGCCGTCTGG CCGAAGCACT GGACGCCCCC GTGATCATGA CCGTCAACGG ACGCGGCGTC
CTGCCGGCGG GACATCCGCT CGGCGTTCCC TGCAGCCCTG CTATGGAGGC GACCAGAGCC
CTCATCGAGA CGGCCGATCT GGTGATCGCG GCAGGCACGG AATTCGGCCC GACGGATTAC
GATTTTTATG AGACCGGCGG CGCGCGCATC GGCGGCAAAC TGATCCGCAT CGACATCGAT
GCCGAACAGG CCATGCGCGG GCGACCGGCC GATCAGGCAC TGATATCGGA TGCTGCTCTC
GCGCTCGAAG CTCTGGCTGC GGCCGTTTCG CCACGCCCGC CGGGTGATGG CGCCGCCCGG
GCGAAATTAG CACGCAGCGG CGTCCGAAAG GCGCTCAATC CCATTCTGCG TGCAGGTGCT
CACCTGATGG AAGTGGTGCG CGACACCTTG CCCGGTGTCG TTATCGTCGG CGACTCCGCA
CAGCCCGTCT ATGCCGGCTG TATCGACTAT GCGGCGACCC GGCCACGATC CTGGTTCTGC
TCGGCCACCG GCTACGGCAC ACTCGGCTAT GCGCTGCCCG CCGCCACCGG AGCACTGATC
GGCACCCGCC GGCCAACGGT ATGCCTCATC GGCGATGGCG GCATTCAATT CACACTGCCG
GAACTTGGTT CCGCCCGCGA GGCAGAGCTG CCACTCATAG TCCTGTTGTG GAACAACAAC
GGCTATGGCG AGATCAAGAG CTACATGGAA ACACGCGGGA TCGAACCGAT CGGCGTCGAC
ATCTTCACAC CCGATTTTCT GACCATTTCG CGCGGCTTCG GTTGCGAGGC TCATCGCATG
AAAGATCACC GCGAGCTGCC GGCCCTCCTG GAGGCCGCGC TGCTGCGCAG ATGCCCCACG
GTGATAGAGA TCGTCGAGGC AGACTATATT GCGGCTATCA ACGGCCAGGA AGAACCGGCC
TTACCCGCCG TCGCCGAGTG A
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| Protein sequence | MKTVGLYLVE LLAAYGVDTV FGIPGVHTVE MYRGLPRSGI RHFTPRHEQG AGFMADGYAR
ATGKPGVCFI ISGPGLTNIA TAMAQAYGDS VPMLVITSVN PPGRMGSGEG HLHELPDQRQ
LGRQFTAFSH TILRADELAQ VVARAFAVFA SARPRPVHIE LPVDLLTADA SALPPARKRP
VPSRPAAEPQ AVAAAAALCT AALRPIILAG GGAADAAVPM RRLAEALDAP VIMTVNGRGV
LPAGHPLGVP CSPAMEATRA LIETADLVIA AGTEFGPTDY DFYETGGARI GGKLIRIDID
AEQAMRGRPA DQALISDAAL ALEALAAAVS PRPPGDGAAR AKLARSGVRK ALNPILRAGA
HLMEVVRDTL PGVVIVGDSA QPVYAGCIDY AATRPRSWFC SATGYGTLGY ALPAATGALI
GTRRPTVCLI GDGGIQFTLP ELGSAREAEL PLIVLLWNNN GYGEIKSYME TRGIEPIGVD
IFTPDFLTIS RGFGCEAHRM KDHRELPALL EAALLRRCPT VIEIVEADYI AAINGQEEPA
LPAVAE
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