| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0726 |
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| Symbol | |
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| ID | 5321563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 780355 |
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| End bp | 781107 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640789663 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001326417 |
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| Protein GI | 150395950 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAACA ATATGATGCC CAATCTGAAA GACCGGATCG CCGTCGTTAC CGGCGCATCA
CGCGGGATCG GCTATTTCAC GGCTCTGGAA CTTGCCAAAG CGGGCGCCCA TGTCGTTGCC
TGTGCACGCA CCGTCGGTGG GCTCGAAGAA CTGGACGATG CGATCAAGGC CCTCGGTGGC
TCGGCGACGC TCGTACCCTT CGATCTTGCG GACATGACCG CCATCGACAA GCTTGGCGGC
GCGATCAACG AACGCTGGGG CAAGCTCGAC ATTTTGGTCG CAAATGCAGG CGTTCTCGGC
ACGATCTCCC CGATTGGCCA TGTCGAAGCC AAGGTCTTCG AAAAGGTGAT GGCGATCAAC
GTCACCGCAA CCTGGCGCCT GATCCGTTCG CTCGAGCCGC TGCTCACCCG CTCCGACACC
GGCCGCGCCC TCATCCTCTC GTCCAGTGCG GCGCATAAGT GCAAACCTTT CTGGGGCCCC
TACTCCGCCT CCAAGGCTGC GGTCGAGGCA CTGGCCCGCA CCTGGGCCTA CGAGACGCAG
CGCCTGCCGC TGCGCATCCT CAGCGTCGAT CCGGGTGCCA CACGCACCGC CATGCGGGCT
CAGGCCATGC CCGGCGAAGA TCCGGAAACC GTGCCCCATC CATCCGAAAT CGCCCAGTCG
CTGATGCCGC TTCTCGGACC CGAGCAGACC GAGACCGGCA AACTTTTCAT CGTTCGGGAA
AAGAAGATCG TCGATTACCG CATGCCGGAA TAG
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| Protein sequence | MNNNMMPNLK DRIAVVTGAS RGIGYFTALE LAKAGAHVVA CARTVGGLEE LDDAIKALGG
SATLVPFDLA DMTAIDKLGG AINERWGKLD ILVANAGVLG TISPIGHVEA KVFEKVMAIN
VTATWRLIRS LEPLLTRSDT GRALILSSSA AHKCKPFWGP YSASKAAVEA LARTWAYETQ
RLPLRILSVD PGATRTAMRA QAMPGEDPET VPHPSEIAQS LMPLLGPEQT ETGKLFIVRE
KKIVDYRMPE
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