| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0718 |
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| Symbol | |
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| ID | 5321555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 769374 |
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| End bp | 770990 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640789655 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_001326409 |
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| Protein GI | 150395942 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.367857 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGGC AACGCATCTA CCTCTTCGAC ACGACTCTTC GAGATGGGCA GCAGACGCCT
GGTATCGATT TTTCCGTCGA GGACAAGATT GCGATCGCGT CCATGCTCGA TCAATTCGGC
ATGGATTACG TCGAAGGCGG ATATCCGGGC GCCAATCCGA CCGATACCGA GTTCTTCAAG
CGCAAACGCA CCGAGAATGC CTCATTCGTG GCGTTCGGAA TGACCAAGCG CGCTGGCGTA
TCCGCCTCCA ACGATCCTGG CCTGAATGCG TTGCTGGGCG CGCAAAGCGA TGCGATCTGT
CTTGTTGCCA AGAGCTGGGA CTATCATGTC GACGTGGCGC TCGGTTGCTC CAATGAGGAG
AATCTCGAAA ATATCCGTGC GTCGGTGGAG GCGGTGGTTG CATCCGGGCG CGAGGCGATG
GTCGATTGCG AGCATTTCTT CGACGGCTTC AAGGCGAACC CCGCCTATGC GCTCGCATGC
GCGACAACGG CTTTTGAAGC CGGCGCACGC TGGGTGGTGC TTTGCGACAC GAATGGCGGG
ACGCAGCCGC CGGAAATCCG AGAGATCGTC TCGGCCGTGA TAGCGGCCGG CGTTCCCGGT
GCAAGTCTCG GTATCCACGC GCATAACGAT ACGGGGCAGG CGGTGGCCAA TTCTCTGGCG
GCGGTCGAAG CCGGCGTTCG TCAGATCCAG GGCACGCTGA ACGGCATCGG CGAGCGCTGC
GGCAACGCCA ACCTCGTAAC GCTGGTTGCG ACGCTTTCGT TGAAGGATGC CTATTCGAGC
CGCTTCGAAA CGGCAATCGA CGCCGAAAGG CTCCAGGAAC TGACCAAGCT CGCGCATGCT
TTCGACGAGT TGCTCAACCG TTCGCCCGAT CCTCAGGCGC CCTATGTCGG CGCTTCGGCC
TTCGCCACCA AAGCCGGAAT TCACGCCTCG GCGCTGCTGA AGGATCCGAG GACCTACGAG
CATGTCGCGC CGGAAAGCGT CGGCAATCTG CGCAAGGTCA TGGTCTCCGA TCAGGGCGGC
AAGGCCAATT TCATCAATGC GCTGAAGCGG CGTGGCATCA CCGTCTCCAA GGACGATCCG
CGGCTGGACA AGTTGATTTC GATCGTCAAG GAGCGGGAGG CAACAGGCTA TGCCTATGAA
GGCGCGGATG CGAGCTTTGC GCTTCTCGCC AGCCGAATAC TCGGCACAGT GCCCGACTTC
TTCCATGTTG AGAGCTTCCG GGTCATGGTC GAGCGCCGCT TCGACGCCAA CGGCAAGCTG
AAGACGGTGT CGGAGGCGGT GGTCAGGGTC ATCGTCGATG GCGAAACGAT GATGTCCGTT
GCCGAGGGGC ATGGCCCCGT CAACGCACTC GACCTCGCAC TCCGGAAGGA CTTGGGGAAG
TACCAGTCCG AAATCGCCGA TCTGGAGCTT GCCGATTACA AGGTGCGCAT CCTCAACGGA
GGCACCGAGG CGGTCACCCG CGTGCTGATC GAATCGACCG ATCGCACCGG CGCACGCTGG
TGGACGGTCG GCGTGTCCGA CAACATCATC GATGCCTCAT TTCAGGCATT GATGGACAGT
ATCGTCTACA AGCTGCTCAA AAATCGCGAT CAGGTCGGAT TGATCGCCGC CGAGTAG
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| Protein sequence | MTRQRIYLFD TTLRDGQQTP GIDFSVEDKI AIASMLDQFG MDYVEGGYPG ANPTDTEFFK
RKRTENASFV AFGMTKRAGV SASNDPGLNA LLGAQSDAIC LVAKSWDYHV DVALGCSNEE
NLENIRASVE AVVASGREAM VDCEHFFDGF KANPAYALAC ATTAFEAGAR WVVLCDTNGG
TQPPEIREIV SAVIAAGVPG ASLGIHAHND TGQAVANSLA AVEAGVRQIQ GTLNGIGERC
GNANLVTLVA TLSLKDAYSS RFETAIDAER LQELTKLAHA FDELLNRSPD PQAPYVGASA
FATKAGIHAS ALLKDPRTYE HVAPESVGNL RKVMVSDQGG KANFINALKR RGITVSKDDP
RLDKLISIVK EREATGYAYE GADASFALLA SRILGTVPDF FHVESFRVMV ERRFDANGKL
KTVSEAVVRV IVDGETMMSV AEGHGPVNAL DLALRKDLGK YQSEIADLEL ADYKVRILNG
GTEAVTRVLI ESTDRTGARW WTVGVSDNII DASFQALMDS IVYKLLKNRD QVGLIAAE
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