Gene Smed_0679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0679 
Symbol 
ID5321516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp731621 
End bp732253 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content62% 
IMG OID640789616 
Producthypothetical protein 
Protein accessionYP_001326370 
Protein GI150395903 
COG category[S] Function unknown 
COG ID[COG3216] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCGCC CATCGAGAGG CGGGCGGGTC CGTCTTGCGC CGGCGGGCGG CTTTGAATGC 
GATCATGACG GCATAATGTT ATTCAGGCGC AGAAAACCGG TCACGATATC CGAGAGACTT
GGCGCGTTCT TTTGGCCGCG CAAAGGGTTC ACGCGCGCTC CGCGCTATAT TGCCCTTCGC
GTTCTCCGTC TGAATTCGTC GCCGCACGCG ATCGCTGTCG GCGTAGCGGC AGGCGCGGCC
TCCTCATTAA CGCCGTTCTT CGGTCTGCAT ATCGTTCTCG CCGTCCTTCT CGCATCTGCC
TTTTCCGGAA ATCTGGTCGC GGCAGCGATC ACGACCGTGC TTGCCAACCC CGTTACCATT
CCTGTCATCC TGACGGCCTC CTACGAGGTC GGTACGATGC TTACGCAGCC GCAAGCCGCT
CAGGCGGTCG GCGGTCAGGA GATCATGCGC ATGCTCGAGC ATCTGGATCT TGCCAGCTTG
TGGGGCCCGG TCTTCAAGCC GATGCTCATA GGCTCGCTTC CTCTTGCCGC GGCGGGTGGC
CTGATATTCT ACCCGCTTGC CTTTCAGACG GCGCGTCTCT TTCAGGAGCG CCGCCGGCGG
GCCCGCGCGC ACAGACTTGG ACATCCAACA TGA
 
Protein sequence
MFRPSRGGRV RLAPAGGFEC DHDGIMLFRR RKPVTISERL GAFFWPRKGF TRAPRYIALR 
VLRLNSSPHA IAVGVAAGAA SSLTPFFGLH IVLAVLLASA FSGNLVAAAI TTVLANPVTI
PVILTASYEV GTMLTQPQAA QAVGGQEIMR MLEHLDLASL WGPVFKPMLI GSLPLAAAGG
LIFYPLAFQT ARLFQERRRR ARAHRLGHPT