| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0635 |
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| Symbol | |
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| ID | 5321471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 679959 |
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| End bp | 681941 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640789571 |
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| Product | cytochrome c-type biogenesis protein CcmF |
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| Protein accession | YP_001326326 |
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| Protein GI | 150395859 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.181407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCATCG AACTCGGGCA TTACGCGCTG GTCCTGGCGC TCGCGACCGC GATCATCCAG
GGCCTCCTGC CCGTCGTCGG GGTACGGCGC GGCGATCCCG CCTTGATGGC GCTTGCTGCA
AACGCGGCGC TCGTCTGCTT TCTGCTGGTC GCATTCTCCT TCGCCGTGCT GACATTCGCT
TATGTGACGT CGGATTTCTC GGTCAAGAAC GTATGGGAGA ACTCGCATTC CCTTAAGCCG
CTGATCTACA AGGTCACCGG GGTCTGGGGA AATCACGAAG GCTCCATGCT CCTGTGGCTG
CTGATCCTCG TCTTCTTTTC CGCGATGGTC GCTCTCTTCG GCCGAAACCT GCCGGAGACG
TTGAAGGCGA ATGTGCTTGC GGTGCAGGCC TGGATCGCGA CGGCATTCAC ACTCTTCGTC
CTGCTGACCT CCAATCCCTT TGCGCGGCTG GTGCCGGCGC CTGGAGAGGG CAGGGACTTG
AATCCGGTGC TTCAGGATAT CGGGCTGGCG ATCCACCCGC CCTTGCTCTA TCTCGGCTAT
GTCGGCTTTT CAGTCTGCTT TTCTTTCGCG GTGGCAGCTC TCATCGAGGG GCGGATCGAC
GCGGCCTGGG CCCGTTGGGT GCGGCCTTGG ACGCTCGCCG CCTGGACCTT TCTCACGGCC
GGCATCGCAA TGGGCTCGTA CTGGGCCTAT TACGAGCTTG GCTGGGGCGG TTGGTGGTTC
TGGGACCCGG TCGAGAATGC CTCCTTCATG CCCTGGCTTG CCGGAACGGC CCTTCTGCAC
TCGGCGCTGG TCATGGAAAA GCGCGAAGCG CTGAAGATCT GGACCGTGCT GCTGGCGATC
ACGACCTTCT CGCTGTCGCT GCTCGGGACC TTCCTGGTAC GCTCCGGCGT GCTGACATCG
GTCCACGCTT TCGCCACCGA CCCGACCCGC GGCGTCTTCA TTCTCGCCAT TCTGGTGGTC
TTCATCGGCG GCGCCTTTTC GCTCTTTGCA TTTCGTGCCT CCCACCTCAA AGCCGGGGGG
ATATTCGCGC CGATCTCGCG CGAGGGCGCC CTTGTCCTGA ACAACCTGAT CCTGACGACG
GCAACCGCGA CGGTGCTGAC CGGCACTCTC TATCCGCTGG TGCTCGAAGC GCTGACCGGC
GACAAGATCT CGGTCGGCGC GCCGTTTTTC AACATGACCT TCGGCCTGCT GATGCTGCCG
CTCGTCGCGG TCGTTCCCTT CGGTCCGCTG CTTGCCTGGA AGCGCGGCGA CCTCGCCGGC
GCGGCGCAGC GGCTGTTTAC GGCTGCTGCC GTAGGCCTGC TTGCCGCCGC AGCCTGCTAT
TACGCGGTAA ATGGCGGCCC GGTGCTGGCT CCACTCGGCC TCGGCCTCGG CGTTTACCTC
ATCATCGGTG CGCTCACCGA CCTTGTCCTG CGCTCCGGAC TCGGCAAGGT AAAGGCCGGC
GTCGCCTGGA AGCGTTTCTC AGGCCTGCCA CGTTCATCTA TCGGCACGGC GCTGGCCCAT
ATCGGTCTCG GCATTACCCT GATAGGGATC GTCGCGGTGA CAGCCTTCGA GACGGAAACG
GTCGTCGAGA TGAAACCGGG GGCGGTGGTC GATGTCGGGC GCTACAGCCT GCGTTTCGAC
GGCATGCGCG AAGGGCGCGG GCCGAACTAC ACCGAGAATG CCGGCCATTT CACCATCAGC
CGCGGCGGCG TCGCCGTCAG TGAGGTCTGG TCGTCGAAGC GGCTCTATTC GGCGCGCCGC
ATGCCGACGA CCGAAGCCGG GATCCGGACC TTCGGCGTGA GCCAGCTCTA TGTTTCCCTG
GGCGATGACA TGGCCGATGG AGGCATCGTC GTGCGCATCT GGTGGAAACC GCTGATCCTG
TGCATCTGGG GCGGTGCGCT CGTGATGATG GCCGGCGGAA TAGTCTCGCT CACCGACAGG
CGTCTTCGCG TGGGCGCACC GGCGCGTGCC AGAAGGCCGC TTGCGGTGGG TGCTGCGGAA
TGA
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| Protein sequence | MIIELGHYAL VLALATAIIQ GLLPVVGVRR GDPALMALAA NAALVCFLLV AFSFAVLTFA
YVTSDFSVKN VWENSHSLKP LIYKVTGVWG NHEGSMLLWL LILVFFSAMV ALFGRNLPET
LKANVLAVQA WIATAFTLFV LLTSNPFARL VPAPGEGRDL NPVLQDIGLA IHPPLLYLGY
VGFSVCFSFA VAALIEGRID AAWARWVRPW TLAAWTFLTA GIAMGSYWAY YELGWGGWWF
WDPVENASFM PWLAGTALLH SALVMEKREA LKIWTVLLAI TTFSLSLLGT FLVRSGVLTS
VHAFATDPTR GVFILAILVV FIGGAFSLFA FRASHLKAGG IFAPISREGA LVLNNLILTT
ATATVLTGTL YPLVLEALTG DKISVGAPFF NMTFGLLMLP LVAVVPFGPL LAWKRGDLAG
AAQRLFTAAA VGLLAAAACY YAVNGGPVLA PLGLGLGVYL IIGALTDLVL RSGLGKVKAG
VAWKRFSGLP RSSIGTALAH IGLGITLIGI VAVTAFETET VVEMKPGAVV DVGRYSLRFD
GMREGRGPNY TENAGHFTIS RGGVAVSEVW SSKRLYSARR MPTTEAGIRT FGVSQLYVSL
GDDMADGGIV VRIWWKPLIL CIWGGALVMM AGGIVSLTDR RLRVGAPARA RRPLAVGAAE
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