Gene Smed_0625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0625 
Symbol 
ID5321461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp670737 
End bp671324 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content67% 
IMG OID640789561 
Producthypothetical protein 
Protein accessionYP_001326316 
Protein GI150395849 
COG category[S] Function unknown 
COG ID[COG5402] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.769425 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTCGAG TTCCCCTCCT TGTCGCTCTT GCCCTCATCG TCGCGTTCGG CGGCGGAATC 
GGCTCGGCCG TATGGGCGCT GAAGGCGACG GTTGGTTTCG GCTCGATTGC GATCGGACCA
TGGGTGGCAT TTCCGGAGGC GCAGATCGTC GCTGCCGACC CCTATGCAAA GGCACATCGC
GCCCGCGCCG GCCAACTGCT CTACGGCGGG GCCGAGGGGC TGGCGTTCAC AGCCCTCACC
GACGACACCG GTGCGCGCCT GTCGGCCGGC TGCTCATACG ATGTTTCCGG CATCACACCG
CCGGCCCGCT TCTGGACCCT TTACGCGGCG GCTCCCGACG GGACCGCACT GCGTCCGGGG
CCGGATCTAC CCTCGGCAAT TAATTCCTGG ACGGTCTTGC GCGCCGAGGA CAGCCGCTTC
GCCATCCACG TCTCGTCCGT CGCCCAGCCC GACAACTGGC TCGCGATCCG CCGGACGGGC
AGCTTCGCCC TCGTGCTGAC GCTCCTCGAT ACGCCCACGG CGGGTTCCTC CGGCCTGATC
GACCTTACGA TGCCTAAGAT CGTCAAGACC GGGTGTGGGC ATGCGTAG
 
Protein sequence
MFRVPLLVAL ALIVAFGGGI GSAVWALKAT VGFGSIAIGP WVAFPEAQIV AADPYAKAHR 
ARAGQLLYGG AEGLAFTALT DDTGARLSAG CSYDVSGITP PARFWTLYAA APDGTALRPG
PDLPSAINSW TVLRAEDSRF AIHVSSVAQP DNWLAIRRTG SFALVLTLLD TPTAGSSGLI
DLTMPKIVKT GCGHA