Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0625 |
Symbol | |
ID | 5321461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 670737 |
End bp | 671324 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640789561 |
Product | hypothetical protein |
Protein accession | YP_001326316 |
Protein GI | 150395849 |
COG category | [S] Function unknown |
COG ID | [COG5402] Uncharacterized conserved protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.769425 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTTCGAG TTCCCCTCCT TGTCGCTCTT GCCCTCATCG TCGCGTTCGG CGGCGGAATC GGCTCGGCCG TATGGGCGCT GAAGGCGACG GTTGGTTTCG GCTCGATTGC GATCGGACCA TGGGTGGCAT TTCCGGAGGC GCAGATCGTC GCTGCCGACC CCTATGCAAA GGCACATCGC GCCCGCGCCG GCCAACTGCT CTACGGCGGG GCCGAGGGGC TGGCGTTCAC AGCCCTCACC GACGACACCG GTGCGCGCCT GTCGGCCGGC TGCTCATACG ATGTTTCCGG CATCACACCG CCGGCCCGCT TCTGGACCCT TTACGCGGCG GCTCCCGACG GGACCGCACT GCGTCCGGGG CCGGATCTAC CCTCGGCAAT TAATTCCTGG ACGGTCTTGC GCGCCGAGGA CAGCCGCTTC GCCATCCACG TCTCGTCCGT CGCCCAGCCC GACAACTGGC TCGCGATCCG CCGGACGGGC AGCTTCGCCC TCGTGCTGAC GCTCCTCGAT ACGCCCACGG CGGGTTCCTC CGGCCTGATC GACCTTACGA TGCCTAAGAT CGTCAAGACC GGGTGTGGGC ATGCGTAG
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Protein sequence | MFRVPLLVAL ALIVAFGGGI GSAVWALKAT VGFGSIAIGP WVAFPEAQIV AADPYAKAHR ARAGQLLYGG AEGLAFTALT DDTGARLSAG CSYDVSGITP PARFWTLYAA APDGTALRPG PDLPSAINSW TVLRAEDSRF AIHVSSVAQP DNWLAIRRTG SFALVLTLLD TPTAGSSGLI DLTMPKIVKT GCGHA
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