Gene Smed_0621 details

Gene Information

• Locus tag: Smed_0621
• ID: 5321457
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sinorhizobium medicae WSM419
• Kingdom: Bacteria
• Replicon accession: NC_009636
• Strand: +
• Start bp: 668556
• End bp: 669218
• Gene Length: 663 bp
• Protein Length: 220 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 640789557
• Product: SH3 type 3 domain-containing protein
• Protein accession: YP_001326312
• Protein GI: 150395845
• COG category: [S] Function unknown
• COG ID: [COG4991] Uncharacterized protein with a bacterial SH3 domain homologue

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 29
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGAAGAAAG TGTTTTTGCG GACCGTGGCT GTCTGTGCGC TGCTGCTGAT GCCCGCAGTT 
GCATCCGCGG CCGAGGGCTT TGCGACCGCT AATGTCAACA TGCGCTCGGG ACCGAGCACC 
TATTATCCGG CAGTGACAGT CATCCCGGCC GGCGATTCGG TGGAAATCCA TGGCTGTCTC 
TCGGACCGCC CCTGGTGCGA CGTGTCCTTT TACGGCGGAC GCGGATGGGT GGCGGGCCGA 
TATGTGCAGG CCGCCTTTCA AAGCCGCAGG GTCTATGTGG AGCCGGAATA TTACCGCCCT 
CTCGGGATCC CGACGGTCGT CTTCGAGTTC GACAGCTATT GGGACCGGAA TTACCGCGGC 
CGTGACTTCT ACCGGGATCG TGACCGCTGG AGGCATGATC GCGATTGGGA TCGCGAGCGT 
GAGCGCGACG GGCGCAAATG GGAGCGCCGC CAGGTGAGGG AGCGCCGAGA CTGGGAGCGC 
GACCGCGACA GGGAGCGGCG CGAATGGGAA CCGGAATACG GTCGCGACGA CGATCGCTGG 
CGACGCAGGG TGGAGAGCGA AGGGTATCGG CCGGACGGTG CGGAACAGCC GCGTCGTGAG 
CGCCGTTACG AGGGGCACAG GACCATCGTG GACTGCAATT CCGGCGACGT TCGCTGCGAA 
TAG 

 

Protein sequence

MKKVFLRTVA VCALLLMPAV ASAAEGFATA NVNMRSGPST YYPAVTVIPA GDSVEIHGCL 
SDRPWCDVSF YGGRGWVAGR YVQAAFQSRR VYVEPEYYRP LGIPTVVFEF DSYWDRNYRG 
RDFYRDRDRW RHDRDWDRER ERDGRKWERR QVRERRDWER DRDRERREWE PEYGRDDDRW 
RRRVESEGYR PDGAEQPRRE RRYEGHRTIV DCNSGDVRCE