| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0595 |
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| Symbol | |
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| ID | 5321431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 642324 |
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| End bp | 644654 |
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| Gene Length | 2331 bp |
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| Protein Length | 776 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640789531 |
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| Product | quinoprotein glucose dehydrogenase |
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| Protein accession | YP_001326286 |
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| Protein GI | 150395819 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03074] membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCATTG TCCTGACCGC TATCGTCTTC GCCGTGATCG GCCTTGTGCT CGGTGCGGGT
GGCACGCGGC TCCTGCTGCT CGGCGGCAGC CCGTATTATC TCATCGCTGG TTTGGGCTTC
CTGCTCACCG CGTTTCTGCT CTTTCGCCGC CGCGCCTGGG CGCTCTGGAT CTATGCGCTT
ATTGTCCTCG GATCGCTTGC CTGGGCAATT TGGGAGGTGG GCTTCGACTG GTGGCAACTC
GGACCTCGGG GCGGCTTAAT CATTCTGCTC GGGCTGTGGC TCCTCACGCC ATGGATCCGG
CGACCGCTCG GTTTCGTCAG CCCCACCGGC GAACAATATG GCGCACGAGC CTGGCCCCTT
GCGCTCGCCA GCCTCATTTC GATCGGCGTC GCATTGTTTT CGATGACCCA GGACCCCCAC
GATATCAGAG GTGATCTGCC CGGCGAGGTC GCGGCAAACG CCAACCTCGG CGGCAACGTG
CCGCCCGGCG AATGGCACCA ATATGGGCGC ACCCCCTTTG GCCAGCGTTA CTCCCCGCTC
GACCAGATCC GGCCGGAGAA CGTCTCGAAC CTGAAGGTGG CCTGGCAGTA TCAGACCGGA
GACGTGAAAC TTCCGGAGGA CGTCAGCGAA ACCACCTATC AGGTAACGCC GCTCAAGGTG
AAGGACACGC TTTATGTGTG CACGCCGCAC AATTGGGCAA TCGCGCTTGA CGCCGCCACC
GGCAAGGAGA AGTGGAAATA CGATTCCAAC TCCGGAATGA ACCCCGATCG GCAGCACCAG
ACCTGCCGGG GCGTGACCTA TTGGGCCGAT ACGGCAGCTG CAGCCGGCAG CCCCTGCGCC
GAACGGGTCT ACCTGCCGAC CTCCGACGCC CGCCTGATTG CACTTGACGC GACGAATGGT
GAGATTTGCA CCGGCTTCGC CGACAACGGG GTTCTGCATC TCGAACAGGG CATGAAGCAC
AACCCTGCGG GTTACTATTA TTCGACCTCG CCGCCGGTGG CCGTCGGCGA CAAGCTCATC
ATCGGCGGGG CGGTCAATGA CAACTATTCG ACCATGGAGC AGTCCGGCGT CATACGTGCC
TTCAACATCA ACACGGGCGC GCTTGTCTGG AATTGGGACA GCGGCAATCC GGATGTGACG
ACGCCGCTTC CTGCGGGGCA GACCTACACG ACCAATTCGC CCAACAGCTG GTCCGTCTTC
AGCTATGATG AGGGCCTCGG CCTTGTCTAC ATCCCCATGG GCAACCAGGT GCCCGACCAG
CTCGGCATGG GCCGCAGCGA GCATGTTGAG AAATACTCGT CTTCCATCGT CGCCCTGGAC
ATCAATACCG GCGCGGTTCG CTGGGTACGG CAGACCGTGC ATCACGACCT GTGGGACATG
GACGTGCCCG CGCAGCCTGC CCTGCTCGAC ATCACAAAGG AGGATGGGAC CGTCCCGGCG
CTCGTCGGGC CGACAAAGCA GGGCGACATC TATGTGCTCG ACAGGCGAAA TGGCGAGCCG
ATAATCCCGA TCGAGGAAGT GCCCGCTCCC GGCGGCGCGA TCCCTGAGGA TTTCGCGGCG
CCGACCCAGC CCGTTTCAGG CCTCACCTTC ATGCCTCCGC CGCTCATGGA ACGCGACATG
TGGGGGATCA GCATGTTCGA TCAGATGGCA TGCCGCATCG AGTTCAGATC GCTGAAATCC
GAAGGGCGCT ACACGCCGCC GTCGCTCGAG GGCACGATCG TCTATCCCGG CAATTTCGGG
ACTTTCAACT GGGGGTCGGT GGCCGTCGAT CCCGAGCGCC AGGTGATGTT CGGGATGCCG
ACCTATCTCG CTTTCACCTC GCGGCTCGTG CCGCGTGACC AGATTGGGCC CAAAGGCGAA
GGCGAGAAGG GTAGTGAACA GGGCCTCAAC CGCAATGAAG GCGCGCCTTA CGGCGTCTAT
ATGGGCCCGT TCCTCGGCCC GCTCGGTATC CCATGCCAGG CCCCGCCATG GGGTTACGTC
GCGGGTGCCG ATCTCAGAAC CGGCAAGATC GCCTACAAGC ACAAGAACGG CACGGTTTAC
GACATGACGC CGCTGCCGCT TCCCTTGAAG GTTGGGGTTC CGGGTATCGG CGGACCTATG
ATCACAAAGG GGGGTCTCGC TTTCCTGGGT GCGGCGGTGG ACAACTATTT CCGGGCCTAT
GACCTGACCA CGGGCGAACA GCTCTGGGAG GCACGGCTGC CGGCCGGCGG CCAATCGACG
CCGATGACCT ATACGGTCGG CGACAAGCAA TATGTCCTGA TCGTCGCAGG GGGGCACGGT
TCGGTCGGCA CCAAGCCGGG CGATTACGTC ATCGCCTATA CGCTGCCCTG A
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| Protein sequence | MLIVLTAIVF AVIGLVLGAG GTRLLLLGGS PYYLIAGLGF LLTAFLLFRR RAWALWIYAL
IVLGSLAWAI WEVGFDWWQL GPRGGLIILL GLWLLTPWIR RPLGFVSPTG EQYGARAWPL
ALASLISIGV ALFSMTQDPH DIRGDLPGEV AANANLGGNV PPGEWHQYGR TPFGQRYSPL
DQIRPENVSN LKVAWQYQTG DVKLPEDVSE TTYQVTPLKV KDTLYVCTPH NWAIALDAAT
GKEKWKYDSN SGMNPDRQHQ TCRGVTYWAD TAAAAGSPCA ERVYLPTSDA RLIALDATNG
EICTGFADNG VLHLEQGMKH NPAGYYYSTS PPVAVGDKLI IGGAVNDNYS TMEQSGVIRA
FNINTGALVW NWDSGNPDVT TPLPAGQTYT TNSPNSWSVF SYDEGLGLVY IPMGNQVPDQ
LGMGRSEHVE KYSSSIVALD INTGAVRWVR QTVHHDLWDM DVPAQPALLD ITKEDGTVPA
LVGPTKQGDI YVLDRRNGEP IIPIEEVPAP GGAIPEDFAA PTQPVSGLTF MPPPLMERDM
WGISMFDQMA CRIEFRSLKS EGRYTPPSLE GTIVYPGNFG TFNWGSVAVD PERQVMFGMP
TYLAFTSRLV PRDQIGPKGE GEKGSEQGLN RNEGAPYGVY MGPFLGPLGI PCQAPPWGYV
AGADLRTGKI AYKHKNGTVY DMTPLPLPLK VGVPGIGGPM ITKGGLAFLG AAVDNYFRAY
DLTTGEQLWE ARLPAGGQST PMTYTVGDKQ YVLIVAGGHG SVGTKPGDYV IAYTLP
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