Gene Smed_0556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0556 
Symbol 
ID5321392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp603964 
End bp604152 
Gene Length189 bp 
Protein Length62 aa 
Translation table11 
GC content58% 
IMG OID640789492 
ProductXRE family transcriptional regulator 
Protein accessionYP_001326247 
Protein GI150395780 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.4035 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGCG AGAACGCGGT CAAGGTCTGG CGCTCCCATC GCGGCATGGC CGCTCGGGAA 
CTGGCAAAAA AGGCCGGGAT CAGCGCTCCG TATCTCTCCG AAAGCAAGAG CGGGAAGAAG
GATGGAAGTC CTTTCGCCGT GAGGAAGATT GCAGATGCTC CTTCCGTTGA TCTCGACGAT
TTGGGGTAA
 
Protein sequence
MAGENAVKVW RSHRGMAARE LAKKAGISAP YLSESKSGKK DGSPFAVRKI ADAPSVDLDD 
LG