| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0506 |
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| Symbol | |
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| ID | 5321340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 549494 |
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| End bp | 550711 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640789440 |
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| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
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| Protein accession | YP_001326197 |
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| Protein GI | 150395730 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.205047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAGAT TCCGATTGGC TCTGGCGACA ATCGCCGTGC TCTTCTTCGG TACCGCTCAG
GCTGTAGCCG GCAGCGCCTC TCTCGTCGTC GATGCCCGGA CGGGCCGCGT CCTCTCCGCC
GAAAACCCCG ACACGCTCAA CCATCCCGCG TCCCTCACCA AGATGATGAC GCTCTATATG
ACCTTCGAGG CGCTGCATCG CGGCCAGCTC GCCTGGAAGA CGCCGGTGCC CATGTCGGCG
ACCGCTGCAC GCAAGCCGCC GACGAAGCTC GGCGTCAGGC CAGGTGAGAC GATCACCGTC
CAGGAGGCCG TCTACGGCAT GATCGTCCGC TCGGCCAACG ACGCGGCGGC GGCGATGGCC
GAACGGCTTG GCGGCACGGA GGAAGGCTTT GCGAGAATGA TGAACGCGAA GGCGCGCCAG
CTCGGCATGA ACCGCACGTT CTTCGTCAAC GCTTCGGGCC TGCCTGCAAG CGAGCAGGTG
ACCACGGCGC GGGACATGGC GCGGCTCGCC GTTGCGCTCA TGCGGCATTA CCCACGCGAG
TATCGTCTGT TCTCGGTCCA GAGCTTCGCC TTCCGCGGCC GCGTGATCCG CGGGCACAAC
AATCTGATGT ATCGTTATCA GGGAATGGAC GGAATCAAGA CCGGCTACAC GCGCGCCTCC
GGTTACAATC TCGTAAGCGC CGTGGCCGAA GGCAATCGCC GCCTTATCGG CGTCGTGCTC
GGCGGGCGAA GCGCACGAAG CCGTGATGAA AAGATGGCGG CGCTCCTCGA CCAGCACCTG
GGCAGGGTCT CATCGCCCGG CCGCCCAATG ATCGAGTCGG CAAACGCGCC TCGCCTTGCG
GACGTGGCGA GCCTGCCTGG CGTTTCCCTG TCCTATGCGG GCACCAAGCC CGCCGTCGAA
GCTCTGGCCG CGCCCGCTGC GGCAGCGCCG ACCACCGTGC CCGCCGCGGT GGCAGCGGCT
TCGGCTCCGA GCTTCTCCAA CGGCTGGCGT ATTCAGCTTT CCACCGCACC AACGGCCGAA
GGTGCGCGCA AGATGCTCGT CGAAGCGCAA TCGGCCGGTG GCGCCGCCCT GCTCGGCGGC
ACGCCGCACT CCGAGGCCGC CGGCAAAGCC TATCGCGTAG GGTTCGTAGG CTTTGTCAGT
CGCGAAGCCG CGGCTATCGC CTGCGACGTC CTGAAGAAGC GGTCCTATGA CTGCGTCCTG
CTTCCCGACG AGGGCTAA
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| Protein sequence | MTRFRLALAT IAVLFFGTAQ AVAGSASLVV DARTGRVLSA ENPDTLNHPA SLTKMMTLYM
TFEALHRGQL AWKTPVPMSA TAARKPPTKL GVRPGETITV QEAVYGMIVR SANDAAAAMA
ERLGGTEEGF ARMMNAKARQ LGMNRTFFVN ASGLPASEQV TTARDMARLA VALMRHYPRE
YRLFSVQSFA FRGRVIRGHN NLMYRYQGMD GIKTGYTRAS GYNLVSAVAE GNRRLIGVVL
GGRSARSRDE KMAALLDQHL GRVSSPGRPM IESANAPRLA DVASLPGVSL SYAGTKPAVE
ALAAPAAAAP TTVPAAVAAA SAPSFSNGWR IQLSTAPTAE GARKMLVEAQ SAGGAALLGG
TPHSEAAGKA YRVGFVGFVS REAAAIACDV LKKRSYDCVL LPDEG
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