| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0440 |
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| Symbol | |
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| ID | 5321274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 476654 |
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| End bp | 477394 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640789375 |
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| Product | regulatory protein LuxR |
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| Protein accession | YP_001326132 |
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| Protein GI | 150395665 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0539143 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGATT TCAGCGTGGA TGTATCCTCA TTGGTCCTCC CCGATGGTCA CGTTATCAGC
GGGTCGATCG AGAATGAGGA TGATGTCAGG GGCGCTCTCG GCCGGGTTTC TGAAGGCTTC
GGGTTTCGCG GCTTCATGGT GCTCGCAATC CCCGATTCCG GGTCCCACAG TCTTACAGCG
CAGGCGCTGA TGACGACTTG GCCCATGGAT TTTCTCAGGC GCTATGACAG TGCCCGCCTG
ATCGACGGCA GTCCGGTAAT CCAGCGGCTG CGGCGCAGCA CCATTCCCTT TACATACGAT
GCGCATCAAC TGGCGCGCGG GCGTGTGGAC GGAAAAGGCG AAGCTGCCAT ATGCGTTTTC
GAACAGGCGA ACATGCCACG TGGGGTCTAT CTGCCCGTCC ATGATGCCGC CGGTCACCGC
GCCGCGGTTG CCTTCGGCGG TGACAGGTCC GCCGTTTCCG GCGATGAGTT GCAGGAATTG
AACCTTTGGG CAGGCCTCTT GTACAGTCGG CTGAGCGAAG TCAGAACGCG CGACCGGCGA
GGTCCGGGCA GCCTTTCCAG GCGCGAGATC GAGTGTTTGC GTTGGGCCGC GGCGGGCAAA
ACGACCGTGG AGATGGCGCG CATCATGGCG CTGTCGGAAT ACACGGTGAA TCACTATCTC
AACCGCGCGA CGCGCAAGCT GGATTCGGTC AATCGGGTCC AAACGGTCGC TAAGGCAATA
CGCGCGGGAT TGATCAATTG A
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| Protein sequence | MIDFSVDVSS LVLPDGHVIS GSIENEDDVR GALGRVSEGF GFRGFMVLAI PDSGSHSLTA
QALMTTWPMD FLRRYDSARL IDGSPVIQRL RRSTIPFTYD AHQLARGRVD GKGEAAICVF
EQANMPRGVY LPVHDAAGHR AAVAFGGDRS AVSGDELQEL NLWAGLLYSR LSEVRTRDRR
GPGSLSRREI ECLRWAAAGK TTVEMARIMA LSEYTVNHYL NRATRKLDSV NRVQTVAKAI
RAGLIN
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