Gene Smed_0417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0417 
Symbol 
ID5321251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp449975 
End bp450535 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content66% 
IMG OID640789352 
Productputative methyltransferase 
Protein accessionYP_001326109 
Protein GI150395642 
COG category[L] Replication, recombination and repair 
COG ID[COG0742] N6-adenine-specific methylase 
TIGRFAM ID[TIGR00095] RNA methyltransferase, RsmD family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.591396 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCATCG TCGGGGGAGA ATTCCGCGGC CGCACGCTGG CCACACCGAA GTCGAACGAC 
ATCCGCCCGA CCACGGACCG GACGCGCGAG AGCCTGTTCA ACATTCTCGG TCACGCCTAT
CCCGAGGTCC TTGACGGGAC GCGCGTCCTC GACCTCTTCG CCGGCACGGG CGCCGTGGGC
TTCGAGGCGC TGTCGCGCGG TTGCCGTCAG GTTCTTTTCG TCGAACAGGG GGTGGAGGGA
CGTGGACTGC TGCGTGTCAA CATCGAGGCG CTTGGCCTTC AGGGGCGGGC AAAGATTTTC
CGTCGCGACG CGACCGACCT CGGCCCCGTC GGGACGATGG AGCCATTTCA TCTGGTGTTT
GCAGATCCGC CCTATGGCAA AGGCCTTGGC GAGCGCGCTC TGATCGCGGC CGCCCGCGGC
GGTTGGCTCG TTGCCGGCGC CCTTGCGATC CTGGAGGAAC GCGCGGATGT CCGGCCGCAG
TTTTCCGAGA GTTTCGAATC GGTCGATGAA CGCGCCTTCG GCGACACGCT CATGCATTTT
CTTCGCTTTC GCGGCGCCTG A
 
Protein sequence
MRIVGGEFRG RTLATPKSND IRPTTDRTRE SLFNILGHAY PEVLDGTRVL DLFAGTGAVG 
FEALSRGCRQ VLFVEQGVEG RGLLRVNIEA LGLQGRAKIF RRDATDLGPV GTMEPFHLVF
ADPPYGKGLG ERALIAAARG GWLVAGALAI LEERADVRPQ FSESFESVDE RAFGDTLMHF
LRFRGA