Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0370 |
Symbol | |
ID | 5321203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 394667 |
End bp | 395449 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640789304 |
Product | hypothetical protein |
Protein accession | YP_001326062 |
Protein GI | 150395595 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.623908 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCACCA GGACCATATT GGCCACCGCC GCAGCCATAG CCGCAATATC CACCGCAGTG CCTGCGAACG CTGCGTACAC CATCCCTGCT AACCAGGCCG TGAAGAACAT AGTCCTCGTT CACGGTGCTT TCGCCGATGG TTCGGGCTGG AGGGGCGTCT ACGACAATCT CACGAAGCGT GGATATCGTG TCACCATCGT CCAGAATCCG TTGACCTCCC TCGAAGACGA TGTTGCCGCC ACCAAGCGTG CGCTTGAGCG GCAAGATGGT CCCGCCATTC TGGTAGGCCA TTCATGGGGT GGGACAGTCA TTACGGAAGC CGGCATTGAT ATGAAGGTCG CGGGACTGGT TTACGTCTCC GCGCTGTCAC CGGACGCAGG CGAGACGTCG GCCCAGCAGT ATGAAGGTTT TGCCCCTGCA ACGGAATTCG TCATCGAGAC CACAAAAGAT GGTTTTGGTT ATGTCAGCCC CGAAAAATTC AAGGCTGGAT TTGCGCATGA CGCCAGCGAC AACGACGTCG CGTTCATGCG GGATTCGCAG GTCCCCATCA ACATGTCGGC GTTCGGCACG ATCCTGGAGA ACGCTGCTTG GCGGACCAAG CCAAGCTGGG CTGTCATCGC CACGGAAGAC AAGGCATTCG ACCAAGCCAT GCTGATCCAT ATGGCAGAGC GGATTAAAGC CAAGATCACC AAAGTCTCAG CAAGCCACGC GCTGCTCATG ACGCAGCCGA CGGTGGTCGC GGACACCATC GACGAGGCCG CGAAAACTGT TTCGGCGCAG TAA
|
Protein sequence | MTTRTILATA AAIAAISTAV PANAAYTIPA NQAVKNIVLV HGAFADGSGW RGVYDNLTKR GYRVTIVQNP LTSLEDDVAA TKRALERQDG PAILVGHSWG GTVITEAGID MKVAGLVYVS ALSPDAGETS AQQYEGFAPA TEFVIETTKD GFGYVSPEKF KAGFAHDASD NDVAFMRDSQ VPINMSAFGT ILENAAWRTK PSWAVIATED KAFDQAMLIH MAERIKAKIT KVSASHALLM TQPTVVADTI DEAAKTVSAQ
|
| |