Gene Smed_0370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0370 
Symbol 
ID5321203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp394667 
End bp395449 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content58% 
IMG OID640789304 
Producthypothetical protein 
Protein accessionYP_001326062 
Protein GI150395595 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.623908 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA GGACCATATT GGCCACCGCC GCAGCCATAG CCGCAATATC CACCGCAGTG 
CCTGCGAACG CTGCGTACAC CATCCCTGCT AACCAGGCCG TGAAGAACAT AGTCCTCGTT
CACGGTGCTT TCGCCGATGG TTCGGGCTGG AGGGGCGTCT ACGACAATCT CACGAAGCGT
GGATATCGTG TCACCATCGT CCAGAATCCG TTGACCTCCC TCGAAGACGA TGTTGCCGCC
ACCAAGCGTG CGCTTGAGCG GCAAGATGGT CCCGCCATTC TGGTAGGCCA TTCATGGGGT
GGGACAGTCA TTACGGAAGC CGGCATTGAT ATGAAGGTCG CGGGACTGGT TTACGTCTCC
GCGCTGTCAC CGGACGCAGG CGAGACGTCG GCCCAGCAGT ATGAAGGTTT TGCCCCTGCA
ACGGAATTCG TCATCGAGAC CACAAAAGAT GGTTTTGGTT ATGTCAGCCC CGAAAAATTC
AAGGCTGGAT TTGCGCATGA CGCCAGCGAC AACGACGTCG CGTTCATGCG GGATTCGCAG
GTCCCCATCA ACATGTCGGC GTTCGGCACG ATCCTGGAGA ACGCTGCTTG GCGGACCAAG
CCAAGCTGGG CTGTCATCGC CACGGAAGAC AAGGCATTCG ACCAAGCCAT GCTGATCCAT
ATGGCAGAGC GGATTAAAGC CAAGATCACC AAAGTCTCAG CAAGCCACGC GCTGCTCATG
ACGCAGCCGA CGGTGGTCGC GGACACCATC GACGAGGCCG CGAAAACTGT TTCGGCGCAG
TAA
 
Protein sequence
MTTRTILATA AAIAAISTAV PANAAYTIPA NQAVKNIVLV HGAFADGSGW RGVYDNLTKR 
GYRVTIVQNP LTSLEDDVAA TKRALERQDG PAILVGHSWG GTVITEAGID MKVAGLVYVS
ALSPDAGETS AQQYEGFAPA TEFVIETTKD GFGYVSPEKF KAGFAHDASD NDVAFMRDSQ
VPINMSAFGT ILENAAWRTK PSWAVIATED KAFDQAMLIH MAERIKAKIT KVSASHALLM
TQPTVVADTI DEAAKTVSAQ