Gene Smed_0334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0334 
Symbol 
ID5321167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp364338 
End bp364682 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content62% 
IMG OID640789269 
Productendoribonuclease L-PSP 
Protein accessionYP_001326027 
Protein GI150395560 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0946724 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATTA AGCGTTTCGA AAGCGGCTCG CGGATGAGCC AGGCCGTGGT CTACAACAAC 
ACCGTCTATC TCGCCGGCCA GGTCGGCAAT GCCGGTGACG ATGTCGTCAC CCAGACGAAG
CAGGCGCTGG CGGAGGTGGA TCGTCTGCTT GCGCTCGCAG GAACGGACAA GACGCGCATT
CTCTCCACGA CCGTCTGGCT CGCGGACATG GCGGACTTTG CCAAGATGAA CTCGGTCTGG
GACGCCTGGG TGCCTCAGGG CAATGCGCCG GCCCGCGCGA CCGGCGAAGC GAAACTGGCG
ACCCCGGAAT ATCTCGTCGA AGTGATCGTG ACGGCAGCTC TCTAA
 
Protein sequence
MEIKRFESGS RMSQAVVYNN TVYLAGQVGN AGDDVVTQTK QALAEVDRLL ALAGTDKTRI 
LSTTVWLADM ADFAKMNSVW DAWVPQGNAP ARATGEAKLA TPEYLVEVIV TAAL