Gene Smed_0256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0256 
SymbolflgC 
ID5321088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp278538 
End bp278957 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content63% 
IMG OID640789191 
Productflagellar basal body rod protein FlgC 
Protein accessionYP_001325950 
Protein GI150395483 
COG category[N] Cell motility 
COG ID[COG1558] Flagellar basal body rod protein 
TIGRFAM ID[TIGR01395] flagellar basal-body rod protein FlgC 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCCTT TGACTTCGGC CCTCAAGGTC TCGGCCTCCG GTCTCCAGGC GGAATCGACG 
CGCTTGCGCA TCGTCTCGGA AAACATCGCC AATGCGCGCT CCACCGGCGA CGCCCCCGGA
ACCGACCCCT ATCGCCGCAA GACGATCAGC TTCGCCGCGG AAGTCGACAG GGCAAGCGGC
GCCTCGCTCG TGGAGGTCGA ACGCCTCGGC ACGGACGATT CGGATTTCAA CGTCGAGTTC
GACCCAGGCA ATCCGGCTGC CGACGAGAAG GGCATGGTGA AGTTGCCCAA CGTCAACATC
CTGATCGAGA TGGCCGACAT GCGCGAGGCC AACCGCGCTT ACGAGGCCAA CCTGCAGACC
ATCAAGCAGG CGCGCGATCT CATCTCCCAG ACAATCGACC TGTTGAGGGC TTCGCAATAA
 
Protein sequence
MDPLTSALKV SASGLQAEST RLRIVSENIA NARSTGDAPG TDPYRRKTIS FAAEVDRASG 
ASLVEVERLG TDDSDFNVEF DPGNPAADEK GMVKLPNVNI LIEMADMREA NRAYEANLQT
IKQARDLISQ TIDLLRASQ