| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0198 |
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| Symbol | |
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| ID | 5321028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 225195 |
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| End bp | 226382 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640789131 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_001325892 |
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| Protein GI | 150395425 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACGAG TGACTGCCCT TCTGCTCTGT ACCGCGCTTG CGGGATGCCA GGCCGTACCG
GGCGAGGGCC CTTTGACAAC CGATATCGTG TCGGATGCCG GCCAGTCCGG ATCCGAGATC
GGCAGAAGGA ATGCCACGGT TTTTGATATC GTCGATGTCG ACGGGCAGTC GGCGCGGCTT
GTTTCCGAGT ATGTTTCCAC AACCCTCAGC CGCCGCTTCG GGATTGGCGG TGGCGTCGGC
CAAGTAGTCA TCGGCATCGG TGACCAGTTG AAGGTCACGA TCTTCGAGGC GGGCAGCGAC
GGCCTGTTTT CCACAACTGA ATCGAAGCAG ACGAGCATCG ACCTCGTCGT CCAGCCCGAT
GGCAAGGCCG CGATTCCCTA TGTTGGATCT GTCCGCTTTG CCGGTCTGAC GCTCGAGCAG
GCGCGGCAGG CGATCCTGGA GGCGCTGAAG CAGAAGGCGG TGGAACCGGA TGTGATCGTG
ACGTCGACAT CGACGGCATC GCGCAACGTG ACTGTCTCCG GCGCGGTCGG CCGCCCCTCG
GTCGTGCCGC TCAATCTCGT CAGCGAGACG ATCAATGAGG TGATCGCCAA GGCGGGCGGC
CCCTCGGCGC AGCCTTACGA GACCTACGTC ACCCTCGTGC GCGGCAAGAA GACCGGCACG
GTCCTGCTGA AGTCGATGAT TGAAAGCCCT TCGGAAAACA TTCACGTAAA GCCCGGCGAC
CAGATCTTCG TTACGCGCGA TCCGCGCACC TTCACGGTCC TCGGCCAGGT CCGGGCCAAT
CAGCGCGTCG AGTTCGGCGC CAACGACCTC AACCTGCTCG AAGCCGTGGC GCTCGGAGGC
GGCGGCTCGG ATCGCACGGT GGACGCCAAG GGCTACTTCG TCTTCCGGTT CGAGGAGCCG
GACATCGTCA TGAGCCTGCT TGGGCAGGAG CGTTTCCATC AGATGCTGAG CAAGGGCATG
AAAGCCGATC GCGTGGGGCG CTATCCCATC GTCTACCGGT TCGACATGAC CAACCCGGAC
AGTCTCATCG TCGGCCAGAC CTTCCCGATC AAGAATCGCG ACGTCATCTA CGCCTCGCGC
CATCCCTCGG TCGATATCAC GAAATTCCTC GACTTCGTCG CACGTCCGAT CGGTATCGTG
AATTCCGGCG TAAACATCGC CGACAATATC GACGACTTCA GAAACTGA
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| Protein sequence | MKRVTALLLC TALAGCQAVP GEGPLTTDIV SDAGQSGSEI GRRNATVFDI VDVDGQSARL
VSEYVSTTLS RRFGIGGGVG QVVIGIGDQL KVTIFEAGSD GLFSTTESKQ TSIDLVVQPD
GKAAIPYVGS VRFAGLTLEQ ARQAILEALK QKAVEPDVIV TSTSTASRNV TVSGAVGRPS
VVPLNLVSET INEVIAKAGG PSAQPYETYV TLVRGKKTGT VLLKSMIESP SENIHVKPGD
QIFVTRDPRT FTVLGQVRAN QRVEFGANDL NLLEAVALGG GGSDRTVDAK GYFVFRFEEP
DIVMSLLGQE RFHQMLSKGM KADRVGRYPI VYRFDMTNPD SLIVGQTFPI KNRDVIYASR
HPSVDITKFL DFVARPIGIV NSGVNIADNI DDFRN
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