| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0189 |
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| Symbol | |
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| ID | 5321019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 208298 |
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| End bp | 209179 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640789122 |
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| Product | xylose isomerase domain-containing protein |
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| Protein accession | YP_001325883 |
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| Protein GI | 150395416 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.258985 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCCG TCGGGTTGAT CTCCATGCAG TTTGCGCGGC CCTTCACGGC CGAACATTTC
CCCCATTTCG CCGGGATGCG AAGGCTCGGC TACGATTTCG TAGAGCTTCT GGTGCCCGAA
CCCGGCGAAA TCGACCTTGC CGAAACGCGC CGCGCGCTGG AAGCCGCCGG GCTCTTCGTG
GTGCTCGCCG CCCGCGTCAG CCTCCAGCGC AATCTTTCCT CGGACGATCC TGCCGCCCAT
CGCGCCGGCA TCGACTATCT GAAATACGCA GCCGACTGCG CCGCCGCGCT CGGCGCCGTG
ATCGTCGGCG GTCCGCTTAC CGGAAATCCT CTGGTCTTTG CGGGCCGGCC GCCGCAGCCT
GTGAGCGAGG AGGAGCGCCT TTCCCGCAAG GCCCGGTGCG TCGCCGGTCT GAAAGAGGCC
GGTGAGCATG CGGCCGGGCT CGGCGTCATG CTGGCGGTCG AACCGCTGAA CCGCTTTGAG
AGCGACGTGC TCTGCACCAC CCGGCAGGCG ATCGAATTGC TCGATGCGGT TGATCATCCC
GCCGTGCAAC TGATGCTCGA CACGTTTCAC ATGCATATGG AGGAGGCCTC GATTGCCGAA
GCAATCCGGC TCGCTGGCAG GCGCATCGTT CATTTCCAGG CCAACGAGAA CCATCGCGGC
TTCCCGGGAA CGGGCGCCAC GGACTGGGTC GCGGTGTTCC GGGCGCTGCA CGAGACAGGC
TATCAAGGCC CCATCTCGCT CGAGCCGTTC CGTCGCAACG ACGACCGTTT CGGCGTGCCC
TTTGCCCAGT GGCGCCCGCC GCACGAGGAC GAGAGCGAAC GCCTCGCCGC CAGCGCCGAA
TTCATCAAGT CCCACATCCT GCTTACGGAA TATCGTCGAT GA
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| Protein sequence | MNPVGLISMQ FARPFTAEHF PHFAGMRRLG YDFVELLVPE PGEIDLAETR RALEAAGLFV
VLAARVSLQR NLSSDDPAAH RAGIDYLKYA ADCAAALGAV IVGGPLTGNP LVFAGRPPQP
VSEEERLSRK ARCVAGLKEA GEHAAGLGVM LAVEPLNRFE SDVLCTTRQA IELLDAVDHP
AVQLMLDTFH MHMEEASIAE AIRLAGRRIV HFQANENHRG FPGTGATDWV AVFRALHETG
YQGPISLEPF RRNDDRFGVP FAQWRPPHED ESERLAASAE FIKSHILLTE YRR
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