| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0179 |
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| Symbol | |
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| ID | 5321009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 196777 |
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| End bp | 198390 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640789112 |
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| Product | hypothetical protein |
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| Protein accession | YP_001325873 |
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| Protein GI | 150395406 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTCG AATTGAAGAC CGTCGGCGAA ACCCTCGTCG ACCTTCTGGA GGCAAACGGC
GTGGAGGTCG TATTCGGCAT TCCCGGCGTG CACACGGTCG AGCTTTATCG TGGCCTTTCC
GCATCGAAAA TCCGCCACGT GACGCCTCGC CACGAACAGG GTGCCGGCTT CATGGCCGAT
GGCTATGCAC GCGTCAGCGG CAAGCCGGGC GTGGCGCTCG TGATCACCGG CCCGGGCCTC
ACCAACACGA TCACCGCCAT GGCGCAGGCC CGGCAGGACT CGATCCCGAT GCTGGTGATC
TCTGGCGTCA ACCGCCGCGA TTCGCTCGGT CATGGGCAGG GGTTGCTCCA CGAACTGCCG
GATCAGCACG GAATGATCAA GACGCTGGCA CTTTATTCGC ACACGCTGCT CAACCCCGCG
GATCTGCCGC TCGTCGTGGA CCGCGCCTTT GCGGTTCTGC TTTCCGGCCG TCCGGGCCCG
GTCCACATCG AGATTCCGAC CGACGTGATG GCGCTCAGGA TCGAGGACCG GCCCTCGGCG
CCGGCAACGG CAACCCGGCC GCGCTCCGAC AGCGAAACGC TGCAGAGGGC AGCGATCCTT
TGTGCGGAGG CCGCCCGCCC GGTCATCGTG TGCGGCGGCG GTGCCCTGAC GGCGGAAGCG
GAAGTGCGTG AACTTGCCGA AAGGATCGGC GCGCCGGTCG TCACGACGGT CAACGCCCGC
GGCATTCTTG CCGGCCATCC GCTCCGGGTG CCGGCAAGCC CCAGCCTCAA GGCGGTGCGC
GCCCTTTTGC GAGAGGCGGA TCTCGTGCTG GCGCTCGGCA CCGAGATGGG CCAGACGGAT
TACGATCTCT ACGCCGATGG CGGTTTTCCG CCGCTGAAGA ACCTTGTTCG CACCGACATC
GATGCGGCGC AGCTCGCACG CGGGCCGCAG GCAGCGCTTT CGATCCTTTC AGGCGCGAGG
GCCGCCACCG CGGGTATTCT GGGCTTCCTG CCGGATCATG CCGCGGCCAG GGACGGCATT
CTTCGGGCGG AGGCCACGCG CAAGGCGGCA TTGAGAGAGC TGACACCGAA AATGCTTGCC
GAGGTCGGCG TCGTCGAGGC GATCTACCGC ACGCTTCCAG ATTGCATCAT CGTCGGCGAT
TCGACTCAGG CCGTCTATGC CGGGAACCTC TATTGCGATG CGCCGCGCCA AAGGGCCTGG
TTCAATTCGG CGACGGGCTA CGGCTCCCTC GGCTATGCGC CCCCCGCCGC GGTCGGTGCT
GCGGTTGCCG ATCGGGAGCG ACCGGTCATA TGTCTTGTCG GCGACGGCGG ATTTCAGTTT
TCCCTGGCGG AGATCGGCTC GGCAGTGGAT GCGGCCGCCC AGGTCGTTTT CCTCGTCTGG
AATAATGACG GGTACCGGGA AATCGAGTCC TACATGGTCG AAAACGGAAT CACGCCGGAA
GGCGTCAAAC CCTCCGCACC CGATTTCCTG CTTGCTGCAA AGGCCTATGG CGTGCCTGCG
GAGCGACTGG CGACGGTGAA GGATCTGCCG CGTGCGCTTG CCGATGCGGT GTCGCGATCG
GGGCCTTCGC TGATCGAGAT CCATCAGGAA AGGACTGCCG GAGCCACAGC GTGA
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| Protein sequence | MSVELKTVGE TLVDLLEANG VEVVFGIPGV HTVELYRGLS ASKIRHVTPR HEQGAGFMAD
GYARVSGKPG VALVITGPGL TNTITAMAQA RQDSIPMLVI SGVNRRDSLG HGQGLLHELP
DQHGMIKTLA LYSHTLLNPA DLPLVVDRAF AVLLSGRPGP VHIEIPTDVM ALRIEDRPSA
PATATRPRSD SETLQRAAIL CAEAARPVIV CGGGALTAEA EVRELAERIG APVVTTVNAR
GILAGHPLRV PASPSLKAVR ALLREADLVL ALGTEMGQTD YDLYADGGFP PLKNLVRTDI
DAAQLARGPQ AALSILSGAR AATAGILGFL PDHAAARDGI LRAEATRKAA LRELTPKMLA
EVGVVEAIYR TLPDCIIVGD STQAVYAGNL YCDAPRQRAW FNSATGYGSL GYAPPAAVGA
AVADRERPVI CLVGDGGFQF SLAEIGSAVD AAAQVVFLVW NNDGYREIES YMVENGITPE
GVKPSAPDFL LAAKAYGVPA ERLATVKDLP RALADAVSRS GPSLIEIHQE RTAGATA
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