| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0174 |
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| Symbol | |
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| ID | 5321004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 192263 |
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| End bp | 192988 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640789107 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001325868 |
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| Protein GI | 150395401 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4215] ABC-type arginine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.390949 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGTCGGGG ATTCCTTCAT CAACTGGAGC CTGCTTTCGC TCTCGGCACC AGGCTGGGGC
GGCCTCCTGC TGCAGGGTTT CCTTAGCTCG ATAGAAATCG CGGTCGGAGG CTATGCTCTC
GGGCTTTTGC TCGGAATCGG CGGCGCCTCG GGCAAGCTTT ATGGCGGTCC GCTGGTGCGT
GATCTCCTGG AGTGCTACAC GACGGTGGTT CGCGCCGTCC CCGAACTGGT GCTTATCCTG
CTCCTCTATT ACGCGGGCAC CGATCTCTTG AACCAGGTTC TGGGCGCCTT TGGCATCGGG
ACGGTCGACA TCAGCGGGCT GATGGCGGGC ATCTTCGTGA TCGGCGTCGT GCAGGGTGCC
TATTCTACGG AGGTTCTTCG TGGCGCGATC AAAGCGGTGC CCGCCGGCCA GATCGAGGCG
GCGCGCGCCT ATGGCATGTC CCCGTTCATG GTGCTTCGGC GCATCACACT TCCGGCGATG
CTCCCCTACG CAATTCCGGG CCTTGCCAAT CTGTGGCTGA TTGCCACCAA GGATACGGCT
TTGCTCGCAG TCGTAGGGTT CAGCGAGCTG ACGCTCGTTA CCCGCCAGGC TGCTGGCGCC
ACCAAGGCCT ATTTACTCTT CTTTTGCGCG GCCGGGGCGC TCTATCTGGC GCTGACACTC
GTTTCCAACG TCTTCATCGG CATGCTCGAG CGCCATGCCC GGCGCGGCTT CGCGGAGCAA
CGATGA
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| Protein sequence | MVGDSFINWS LLSLSAPGWG GLLLQGFLSS IEIAVGGYAL GLLLGIGGAS GKLYGGPLVR
DLLECYTTVV RAVPELVLIL LLYYAGTDLL NQVLGAFGIG TVDISGLMAG IFVIGVVQGA
YSTEVLRGAI KAVPAGQIEA ARAYGMSPFM VLRRITLPAM LPYAIPGLAN LWLIATKDTA
LLAVVGFSEL TLVTRQAAGA TKAYLLFFCA AGALYLALTL VSNVFIGMLE RHARRGFAEQ
R
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