Gene Smed_0150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0150 
Symbol 
ID5320980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp168038 
End bp168445 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content59% 
IMG OID640789083 
Productglutathione-dependent formaldehyde-activating GFA 
Protein accessionYP_001325844 
Protein GI150395377 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0696937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAATG CCCAATGCGC TTGCGGCGCA CTTAAACTGA TGGTCAGCGA GCCGCCACAA 
TTGACTGCGG TGTGCCACTG CCTGGCTTGC CAACGGCGAA CCGGTGCGCC CTTCAGCGCC
AATGCGTTCT ACTCGGCTGA ATGTGTCGAG ATCTCGGGAG CCTCTACGGA ATTCATTCGT
ATCGCAGAGA GCGGTCGCAA GGTCCGTATG TACTTTTGCC CGATTTGCGG CTCGACCGTC
TATTGGAGAG CCGATGGCGC TCCGTCCTGG ATCGGGGTCG CGGTAGGTTC TTTCGCCGAA
CCGGCCTTCG CGCCACCCTC CATGTCGGTA TTCGAACAAT CGAGACATAA ATGGGTGCAG
CTTGACGACG CGCTCGAGCA CTTCGAAGGC CTTCCAACCG GGCATTAG
 
Protein sequence
MANAQCACGA LKLMVSEPPQ LTAVCHCLAC QRRTGAPFSA NAFYSAECVE ISGASTEFIR 
IAESGRKVRM YFCPICGSTV YWRADGAPSW IGVAVGSFAE PAFAPPSMSV FEQSRHKWVQ
LDDALEHFEG LPTGH