Gene Smed_0132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0132 
Symbol 
ID5320961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp146248 
End bp146865 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content61% 
IMG OID640789065 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_001325827 
Protein GI150395360 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.827447 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGATG GCGCGCTGCG CAGACGTCTG GACCCGGTTC TGGACAGGCT CGGTGCCGCA 
CTTGCCGAGC GCGGAATAGG CGCCGATTCC ATTACGATCC TCGGCCTTTG CCTTGGCCTT
GCGGCAGCCC TTCTCGTTGG TCTCGGCGCA TATCACTCCG CCGCCATTTT GATCCTCGTG
AGCCGCTTCT GCGACGGCCT TGATGGCGCC GTCGCCCGTG CGAGCCGGAG AACGGATTTC
GGCGGCTTCC TCGACATCGT CCTCGATTTC GCCTTTTACG GCGCCGTGCC ACTGGGTTTC
ATTGCCGCCG ATCCGGGCGC AAACGGGCTT GCCGGCGGCT TTTTGCTGTT CGCCTTTTAC
GTCAACGGGG CGAGCTTCCT CGCCTATGCG GTGATGGCCG AGAAGCGCGC CATGACCACC
ATGATACGCG GTGCGAAGTC GTTATATTTC ACCACCGGGC TTGCGGAGGC GACCGAGACG
ATCGTGTTCT TCCTGCTCTC GTGCCTTTTC CCGGCGTGGT TCCCGGTACT GGCGTCGGTT
TTCGCGCTTG TTTGTCTCTA TACCGCGCTG TCGCGGATCA TTCTCGCAAG ACTGACATTT
CCGAAAGACG TGCAATGA
 
Protein sequence
MLDGALRRRL DPVLDRLGAA LAERGIGADS ITILGLCLGL AAALLVGLGA YHSAAILILV 
SRFCDGLDGA VARASRRTDF GGFLDIVLDF AFYGAVPLGF IAADPGANGL AGGFLLFAFY
VNGASFLAYA VMAEKRAMTT MIRGAKSLYF TTGLAEATET IVFFLLSCLF PAWFPVLASV
FALVCLYTAL SRIILARLTF PKDVQ