| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0131 |
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| Symbol | |
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| ID | 5320960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 145040 |
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| End bp | 146011 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640789064 |
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| Product | transposase IS116/IS110/IS902 family protein |
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| Protein accession | YP_001325826 |
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| Protein GI | 150395359 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3547] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.482202 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACATC CTGATGTGAT CGGATGCGAT ATTGCAAAAG CGCATCTAGA TTTTTTCGAC
AGCGGCCTTG AGCGCCATTT CCGTATCGAC AACACTCCGG CCGCAATTTC CGCGTGGCTC
GACGGCCTTG ATGGCAGAGG CGTTCATATC GTCTTTGAGG CGACCGGGCG TTACGATCGG
CAGTTGCGCA TAGCCCTGGA GACCCGGGAG TTGCCCTATT CCCGCGTCAA TCCTGCCCGC
GCCCGCGACT TTGCCAAGGC GATCGGCCTT CTTGCCAAGA CGGATGCGAT CGATGCACGT
CTGCTTGCCC GGATGGGTCA AAGCCTGCCA CTCTCAACTC AGGCGCCTGA CGATCCCGCC
CGCCACGTGC TCGCCCGCCT TCACACGCGG CGTGACCAGC TCGTGGCCAT GCGCCAGCAA
GAGCGGACAC GCCTTCATGA GACCGAGGGG ATCGAGCGTG ACAGTGCTGA AAGCCATATG
GCTTGGCTCG ACGCGGAGGT TGCGCGCATC GAAATGGCAT GCCGTGATGT TCTGAAGGCC
GAGAAGACCT TGCAAGAACA AGAGGCAAGG CTGCGTTCCA TTCCCGGCAT CGGCCCCGTG
GCCGCATTGA CCCTGATCGC GCATATGCCA GAACTCGGCA ATCGTTCTGC CAAGGCGATT
GCAGCCCTTG CCGGTCTTGC GCCCTTCAAT GTCGACAGCG GCACGTCACG GGGAAAGCGG
CATATACGCG GCGGTCGCAA GCGGATACGT GACGCGCTCT ACATGGCGGC GCTCACAGCC
AGCCGTATGC CCCGTGCTTT TAAGTCCCAT GCTGACCAAA ATGAAGGAGG CAGGCAAGCC
CTTCAAGGTC GTCATCATTG CGCTTGCCCG CAAATTGCTC GCCATCGCAA ACGCCATCAT
CAGGGACAAA ACAACCTTCC GACGAACCAC CTGACAAACA CAGTTGCCAG TCAGTCCAAG
TCCCAGCGTT GA
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| Protein sequence | MIHPDVIGCD IAKAHLDFFD SGLERHFRID NTPAAISAWL DGLDGRGVHI VFEATGRYDR
QLRIALETRE LPYSRVNPAR ARDFAKAIGL LAKTDAIDAR LLARMGQSLP LSTQAPDDPA
RHVLARLHTR RDQLVAMRQQ ERTRLHETEG IERDSAESHM AWLDAEVARI EMACRDVLKA
EKTLQEQEAR LRSIPGIGPV AALTLIAHMP ELGNRSAKAI AALAGLAPFN VDSGTSRGKR
HIRGGRKRIR DALYMAALTA SRMPRAFKSH ADQNEGGRQA LQGRHHCACP QIARHRKRHH
QGQNNLPTNH LTNTVASQSK SQR
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