Gene Smal_4002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_4002 
Symbol 
ID6474896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4522090 
End bp4522869 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content65% 
IMG OID642733215 
Productprotein of unknown function DUF81 
Protein accessionYP_002030384 
Protein GI194367774 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.870247 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.121149 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGGAAC TGGTTCCCCC TGAGTTGTGG TGGCTGGTGG TGATCGCCTT CATCGCCGGC 
CTTGTGGATG CCGCCGTCGG TGGCGGTGGC CTGGTGCAGC TGCCCGGCCT GTTCACGGTG
CTGCCGCAGC AGACGCCGGC GATGCTGTTC GGTACCAACA AGTTCAGCTC GATGTTCGGC
ACGGGTGCAG CGGCCTGGCG CTATGCACGC AATGTGCGCT TCCCGTGGAA GCCGGTGCTG
TTCGCGGCTG GCACGGCCTT CATCTTCTCC TTCGCCGGGG CCACCGCGGT GAGCCTGCTG
CCCAAGGATG CGGTGCGCCC GCTGGTACTG GTGCTGCTGA TCGCGATGCT GGCTTACACG
CTATGGAAGA AGGATTTCGG TGCACTGCAC CGGCCGCAGG AGATCGGCCG CCGCGAGCTG
GCCATCGCAC TGGCCATTGG TGCGGCGATC GGCTTCTACG ATGGCTTCTT CGGGCCAGGT
ACGGGCAGCT TCCTGATCTT CCTGTTCGTG CGCTTCTTCG GCCTGGATTT CCTGCGCGCA
TCGGCCGCGT CAAAGGTGGT GAACCTGGCG ACCAATGTGG CGGCGATCTC GTTCTTCGTG
CCGACCGGCA ACATCCTGTG GCTGTTCGCG CTGCCGATGG CGGCGGCCAA CATCATTGGA
TCGGTGGTGG GCACGCGGTT GGCGCTGAAG GGCGGTACGC CGTTCATCCG CAAGCTGTTC
GTGGGGCTGG TGGTGGTGCT GATCGCGCGG ATGGCGTGGG ATACGTTGCG CGGAGCGTGA
 
Protein sequence
MLELVPPELW WLVVIAFIAG LVDAAVGGGG LVQLPGLFTV LPQQTPAMLF GTNKFSSMFG 
TGAAAWRYAR NVRFPWKPVL FAAGTAFIFS FAGATAVSLL PKDAVRPLVL VLLIAMLAYT
LWKKDFGALH RPQEIGRREL AIALAIGAAI GFYDGFFGPG TGSFLIFLFV RFFGLDFLRA
SAASKVVNLA TNVAAISFFV PTGNILWLFA LPMAAANIIG SVVGTRLALK GGTPFIRKLF
VGLVVVLIAR MAWDTLRGA